RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Kmt2bO08550 2713 aa9.67□□□□□ -0.86
Notch1-201ENSMUST00000028288 Rtl10D3YWW5 146 aa9.65□□□□□ -0.86
Notch1-201ENSMUST00000028288 Gm5153P01627 120 aa9.65□□□□□ -0.86
Notch1-201ENSMUST00000028288 Defb38Q7TNV7 63 aa9.65□□□□□ -0.86
Notch1-201ENSMUST00000028288 H2al1kJ3QP08 105 aa9.65□□□□□ -0.86
Notch1-201ENSMUST00000028288 Igkv8-28A0A0G2JE47 121 aa9.65□□□□□ -0.87
Notch1-201ENSMUST00000028288 CrygeQ03740 174 aa9.64□□□□□ -0.87
Notch1-201ENSMUST00000028288 Gm17509Q9CZ61 145 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 Ighv8-13A0A075B5Y0 101 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 Shisa2Q8QZV2 295 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 Defb2P82020 71 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 Gm10845Q3UNY9 185 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 C130032M10RikQ8C888 123 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 Q9DAB9 146 aa9.63□□□□□ -0.87
Notch1-201ENSMUST00000028288 Adm2Q7TNK8 150 aa9.62□□□□□ -0.87
Notch1-201ENSMUST00000028288 Gm10549Q3URY4 149 aa9.62□□□□□ -0.87
Notch1-201ENSMUST00000028288 Gm5464Q3UY29 175 aa9.62□□□□□ -0.87
Notch1-201ENSMUST00000028288 Apoc4Q61268 124 aa9.61□□□□□ -0.87
Notch1-201ENSMUST00000028288 Prr9Q8BV84 116 aa9.61□□□□□ -0.87
Notch1-201ENSMUST00000028288 UqcrqQ9CQ69 82 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Unc79Q0KK59 2596 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Wfdc6bF6ULY1 148 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Ighv2-9A0A075B5Q5 116 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 4930518I15RikQ3V2W7 57 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Smr3aQ61900 147 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Cdip1Q9DB75 208 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Zfand2aQ9JII7 171 aa9.59□□□□□ -0.87
Notch1-201ENSMUST00000028288 Map1aQ9QYR6 2776 aa9.58□□□□□ -0.88
Notch1-201ENSMUST00000028288 Bri3P28662 125 aa9.58□□□□□ -0.88
Notch1-201ENSMUST00000028288 Gcn1E9PVA8 2671 aaKnown RBP9.57□□□□□ -0.88
Notch1-201ENSMUST00000028288 Gm9887F6RFI0 207 aa9.57□□□□□ -0.88
Notch1-201ENSMUST00000028288 SnurfQ9WU12 71 aa9.57□□□□□ -0.88
Notch1-201ENSMUST00000028288 Odf3l2Q3TZ65 277 aa9.57□□□□□ -0.88
Notch1-201ENSMUST00000028288 Csdc2Q91YQ3 154 aa9.57□□□□□ -0.88
Notch1-201ENSMUST00000028288 1600014C23RikQ9DAX4 101 aa9.56□□□□□ -0.88
Notch1-201ENSMUST00000028288 Ep400Q8CHI8 3072 aaKnown RBP9.56□□□□□ -0.88
Notch1-201ENSMUST00000028288 Gm28230A0A0A0MQ91 144 aa9.55□□□□□ -0.88
Notch1-201ENSMUST00000028288 CicQ924A2 2510 aa9.55□□□□□ -0.88
Notch1-201ENSMUST00000028288 Gm10570F6VB42 170 aa9.53□□□□□ -0.88
Notch1-201ENSMUST00000028288 Ighv1-56A0A0A6YXG2 117 aa9.53□□□□□ -0.88
Notch1-201ENSMUST00000028288 Ankrd11E9Q4F7 2643 aa9.53□□□□□ -0.88
Notch1-201ENSMUST00000028288 Ntn5Q3UQ22 452 aa9.52□□□□□ -0.89
Notch1-201ENSMUST00000028288 Znf580Q9DB38 172 aa9.52□□□□□ -0.89
Notch1-201ENSMUST00000028288 Gm16485Q8C4B7 115 aa9.52□□□□□ -0.89
Notch1-201ENSMUST00000028288 Cd164Q9R0L9 197 aa9.51□□□□□ -0.89
Notch1-201ENSMUST00000028288 Reg3aO09037 175 aa9.5□□□□□ -0.89
Notch1-201ENSMUST00000028288 Gm10300Q8C8P7 189 aa9.49□□□□□ -0.89
Notch1-201ENSMUST00000028288 Q9DAA7 145 aa9.49□□□□□ -0.89
Notch1-201ENSMUST00000028288 Defb45Q3V490 66 aa9.49□□□□□ -0.89
Notch1-201ENSMUST00000028288 Wfdc17Q5SSJ1 76 aa9.49□□□□□ -0.89
Notch1-201ENSMUST00000028288 Crip3Q6Q6R3 243 aa9.48□□□□□ -0.89
Notch1-201ENSMUST00000028288 A730009L09RikA0A1B0GS82 72 aa9.48□□□□□ -0.89
Notch1-201ENSMUST00000028288 Ly6g6cQ9Z1Q4 126 aa9.48□□□□□ -0.89
Notch1-201ENSMUST00000028288 4930519P11RikQ9CUJ8 166 aa9.47□□□□□ -0.89
Notch1-201ENSMUST00000028288 Jbts17Q8CE72 3214 aa9.47□□□□□ -0.89
Notch1-201ENSMUST00000028288 Mrpl34Q99N91 92 aa9.47□□□□□ -0.89
Notch1-201ENSMUST00000028288 Igkv8-19A0A0G2JFN8 121 aa9.47□□□□□ -0.89
Notch1-201ENSMUST00000028288 CenpfE9Q3P4 2997 aaKnown RBP9.45□□□□□ -0.9
Notch1-201ENSMUST00000028288 FlnaQ8BTM8 2647 aaKnown RBP9.45□□□□□ -0.9
Notch1-201ENSMUST00000028288 3110070M22RikQ9DAQ7 118 aa9.44□□□□□ -0.9
Notch1-201ENSMUST00000028288 Cox6a2P43023 97 aa9.44□□□□□ -0.9
Notch1-201ENSMUST00000028288 Coa6Q8BGD8 79 aa9.44□□□□□ -0.9
Notch1-201ENSMUST00000028288 FasnP19096 2504 aaKnown RBP9.43□□□□□ -0.9
Notch1-201ENSMUST00000028288 Msrb1Q9JLC3 116 aa9.43□□□□□ -0.9
Notch1-201ENSMUST00000028288 UtrnE9Q6R7 3430 aa9.42□□□□□ -0.9
Notch1-201ENSMUST00000028288 Gm43218A0A0G2JGT0 114 aa9.42□□□□□ -0.9
Notch1-201ENSMUST00000028288 Defb10Q8R2I8 73 aa9.42□□□□□ -0.9
Notch1-201ENSMUST00000028288 Gm3285A0A1W2P7U0 201 aa9.41□□□□□ -0.9
Notch1-201ENSMUST00000028288 Defb37Q7TMD2 62 aa9.41□□□□□ -0.9
Notch1-201ENSMUST00000028288 Bean1Q9EQG5 255 aa9.41□□□□□ -0.9
Notch1-201ENSMUST00000028288 Fam19a3Q7TPG6 132 aa9.41□□□□□ -0.9
Notch1-201ENSMUST00000028288 6430550D23RikE9Q1X6 194 aa9.4□□□□□ -0.9
Notch1-201ENSMUST00000028288 P01819 144 aa9.4□□□□□ -0.9
Notch1-201ENSMUST00000028288 Chchd10Q7TNL9 138 aa9.4□□□□□ -0.9
Notch1-201ENSMUST00000028288 Igkv8-27A0A0G2JF28 120 aa9.4□□□□□ -0.9
Notch1-201ENSMUST00000028288 1700018G05RikA0A1B0GSI2 66 aa9.4□□□□□ -0.9
Notch1-201ENSMUST00000028288 Defb39Q70KL3 74 aa9.39□□□□□ -0.91
Notch1-201ENSMUST00000028288 Akap13E9Q394 2776 aa9.39□□□□□ -0.91
Notch1-201ENSMUST00000028288 Ighv2-5A0A0A6YY69 116 aa9.38□□□□□ -0.91
Notch1-201ENSMUST00000028288 HrnrQ8VHD8 2496 aa9.38□□□□□ -0.91
Notch1-201ENSMUST00000028288 Spint4Q9D263 159 aa9.38□□□□□ -0.91
Notch1-201ENSMUST00000028288 Gm28374F6SG70 93 aa9.36□□□□□ -0.91
Notch1-201ENSMUST00000028288 Gm10642Q3TWM1 71 aa9.36□□□□□ -0.91
Notch1-201ENSMUST00000028288 CrygaP04345 174 aa9.35□□□□□ -0.91
Notch1-201ENSMUST00000028288 Cep350E9Q309 3095 aa9.35□□□□□ -0.91
Notch1-201ENSMUST00000028288 Dmac1Q9CQ00 111 aa9.34□□□□□ -0.91
Notch1-201ENSMUST00000028288 Ighv2-2A0A075B5P8 116 aa9.34□□□□□ -0.91
Notch1-201ENSMUST00000028288 P01821 116 aa9.34□□□□□ -0.91
Notch1-201ENSMUST00000028288 Gm11627A6PWP4 55 aa9.34□□□□□ -0.91
Notch1-201ENSMUST00000028288 Gm9195A0A140LHT4 2805 aa9.33□□□□□ -0.92
Notch1-201ENSMUST00000028288 Gm17606F6ZL36 78 aa9.33□□□□□ -0.92
Notch1-201ENSMUST00000028288 AtrQ9JKK8 2635 aa9.33□□□□□ -0.92
Notch1-201ENSMUST00000028288 Sostdc1Q9CQN4 206 aa9.33□□□□□ -0.92
Notch1-201ENSMUST00000028288 Gm10160F6Y577 67 aa9.33□□□□□ -0.92
Notch1-201ENSMUST00000028288 AI854703Q8BIN3 203 aa9.32□□□□□ -0.92
Notch1-201ENSMUST00000028288 Elof1P60003 83 aa9.32□□□□□ -0.92
Notch1-201ENSMUST00000028288 Gm10197F6QEY5 67 aa9.31□□□□□ -0.92
Notch1-201ENSMUST00000028288 Gm21886J3QJU9 214 aa9.31□□□□□ -0.92
Notch1-201ENSMUST00000028288 A530084C06RikQ3UTW2 186 aa9.3□□□□□ -0.92
Notch1-201ENSMUST00000028288 2310034G01RikA0A286YDL3 209 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms