RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Ighv2-5A0A0A6YY69 116 aa10.42□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Crip2Q9DCT8 208 aaKnown RBP10.41□□□□□ -0.74
Col7a1-201ENSMUST00000026740 B430305J03RikQ8BQQ8 176 aa10.4□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Ighv1-56A0A0A6YXG2 117 aa10.4□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Wfdc3Q14AE4 130 aa10.4□□□□□ -0.74
Col7a1-201ENSMUST00000026740 Gm5153P01627 120 aa10.39□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Cep192E9Q4Y4 2514 aaKnown RBP10.39□□□□□ -0.75
Col7a1-201ENSMUST00000026740 A0A286YCN5 57 aa10.38□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Ighv2-2A0A075B5P8 116 aa10.38□□□□□ -0.75
Col7a1-201ENSMUST00000026740 P01821 116 aa10.38□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Ly6g6cQ9Z1Q4 126 aa10.38□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Pla2g2cP48076 150 aa10.38□□□□□ -0.75
Col7a1-201ENSMUST00000026740 SetxA2AKX3 2646 aa10.37□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Spint4Q9D263 159 aa10.37□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Abca12E9Q876 2595 aa10.37□□□□□ -0.75
Col7a1-201ENSMUST00000026740 P01819 144 aa10.37□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Mp68P56379 58 aa10.37□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Gm10160F6Y577 67 aa10.36□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Wfdc17Q5SSJ1 76 aa10.36□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Unc79Q0KK59 2596 aa10.36□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Rps28P62858 69 aaKnown RBP10.35□□□□□ -0.75
Col7a1-201ENSMUST00000026740 4930518I15RikQ3V2W7 57 aa10.35□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Igkv8-27A0A0G2JF28 120 aa10.35□□□□□ -0.75
Col7a1-201ENSMUST00000026740 4930432M17RikQ3V0W9 174 aa10.34□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Bean1Q9EQG5 255 aa10.34□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Gm9573F7C950 1606 aa10.34□□□□□ -0.75
Col7a1-201ENSMUST00000026740 Gm43218A0A0G2JGT0 114 aa10.33□□□□□ -0.76
Col7a1-201ENSMUST00000026740 CicQ924A2 2510 aa10.33□□□□□ -0.76
Col7a1-201ENSMUST00000026740 NrgnP60761 78 aa10.33□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Odf3l2Q3TZ65 277 aa10.33□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Gm5464Q3UY29 175 aa10.33□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Akap13E9Q394 2776 aa10.33□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Fn1P11276 2477 aaKnown RBP10.32□□□□□ -0.76
Col7a1-201ENSMUST00000026740 4930507D05RikQ8C9C9 103 aa10.32□□□□□ -0.76
Col7a1-201ENSMUST00000026740 6430550D23RikE9Q1X6 194 aa10.32□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Q9DAA7 145 aa10.31□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Reg3aO09037 175 aa10.31□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Q9DAB9 146 aa10.31□□□□□ -0.76
Col7a1-201ENSMUST00000026740 D730001G18RikA0A087WQU7 115 aa10.3□□□□□ -0.76
Col7a1-201ENSMUST00000026740 A930009A15RikG3UYI6 118 aa10.3□□□□□ -0.76
Col7a1-201ENSMUST00000026740 BC025920Q3US60 128 aa10.3□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Cox6a2P43023 97 aa10.3□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Defb38Q7TNV7 63 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 1600014C23RikQ9DAX4 101 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Msrb1Q9JLC3 116 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Gm9767G3X930 207 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 A730009L09RikA0A1B0GS82 72 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Mrpl34Q99N91 92 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Bahcc1Q3UHR0 2643 aa10.29□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Gm11627A6PWP4 55 aa10.28□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Rtl10D3YWW5 146 aa10.28□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Gm3443F7CCV5 94 aa10.28□□□□□ -0.76
Col7a1-201ENSMUST00000026740 Gm26566Q8CAC1 153 aa10.27□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Cyyr1Q8VIH7 165 aa10.27□□□□□ -0.77
Col7a1-201ENSMUST00000026740 B230217C12RikE9Q3Z1 139 aa10.27□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Znf580Q9DB38 172 aa10.27□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Znf575Q3TXZ1 239 aa10.26□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Dmac1Q9CQ00 111 aa10.25□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Defb10Q8R2I8 73 aa10.25□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Defb45Q3V490 66 aa10.25□□□□□ -0.77
Col7a1-201ENSMUST00000026740 2310034G01RikA0A286YDL3 209 aa10.24□□□□□ -0.77
Col7a1-201ENSMUST00000026740 SnurfQ9WU12 71 aa10.24□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Cd164l2Q9D6W7 172 aa10.24□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Col4a2P08122 1707 aa10.21□□□□□ -0.77
Col7a1-201ENSMUST00000026740 Q8BGJ3 129 aa10.2□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Gm9903Q8C9Y8 129 aa10.2□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Krtap16-1A2A5X5 502 aa10.19□□□□□ -0.78
Col7a1-201ENSMUST00000026740 CdsnQ7TPC1 561 aa10.19□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Prol1E9PYQ4 312 aa10.19□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Gm10643Q3URG9 111 aa10.18□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Gm10135F6TEE5 83 aa10.16□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Spink13Q3UTS8 97 aa10.16□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Pla2g2eQ9QUL3 142 aa10.16□□□□□ -0.78
Col7a1-201ENSMUST00000026740 Defb50Q6TU36 73 aa10.15□□□□□ -0.78
Col7a1-201ENSMUST00000026740 A930002H24RikQ8C8Y3 163 aa10.15□□□□□ -0.78
Col7a1-201ENSMUST00000026740 AplnQ9R0R4 77 aa10.15□□□□□ -0.78
Col7a1-201ENSMUST00000026740 4930519P11RikQ9CUJ8 166 aa10.15□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Psors1c2Q80ZC9 134 aa10.14□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Defb39Q70KL3 74 aa10.14□□□□□ -0.79
Col7a1-201ENSMUST00000026740 RetnlbQ99P86 105 aa10.14□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm10837Q3UTT8 145 aa10.14□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Znf414Q9DCK4 299 aa10.14□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Crip3Q6Q6R3 243 aa10.13□□□□□ -0.79
Col7a1-201ENSMUST00000026740 AI606181Q8C7B9 129 aa10.13□□□□□ -0.79
Col7a1-201ENSMUST00000026740 CrygaP04345 174 aa10.13□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm16181B0V2H2 73 aa10.12□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Lce6aD3YV94 81 aa10.12□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm10999F6Q4M4 69 aa10.12□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm10197F6QEY5 67 aa10.12□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Elof1P60003 83 aa10.11□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm20661K7N787 53 aa10.1□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm21886J3QJU9 214 aa10.1□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Cdip1Q9DB75 208 aa10.1□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Gm17689B3GLJ4 109 aa10.1□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Uqcr11Q9CPX8 56 aa10.1□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Prrc2cQ3TLH4 2846 aaKnown RBP10.1□□□□□ -0.79
Col7a1-201ENSMUST00000026740 Stab1Q8R4Y4 2571 aa10.08□□□□□ -0.8
Col7a1-201ENSMUST00000026740 3110070M22RikQ9DAQ7 118 aa10.08□□□□□ -0.8
Col7a1-201ENSMUST00000026740 Sostdc1Q9CQN4 206 aa10.08□□□□□ -0.8
Col7a1-201ENSMUST00000026740 A530084C06RikQ3UTW2 186 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 112.2 ms