RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Pet100P0DJE0 76 aa7.74□□□□□ -1.17
Msh3-201ENSMUST00000022220 Fam19a5Q91WE9 132 aa7.74□□□□□ -1.17
Msh3-201ENSMUST00000022220 4930524J08RikQ9CUJ5 163 aa7.74□□□□□ -1.17
Msh3-201ENSMUST00000022220 Gm10647E9Q8X0 124 aa7.73□□□□□ -1.17
Msh3-201ENSMUST00000022220 Fgfbp3Q1HCM0 245 aa7.73□□□□□ -1.17
Msh3-201ENSMUST00000022220 HrnrQ8VHD8 2496 aa7.73□□□□□ -1.17
Msh3-201ENSMUST00000022220 D730001G18RikA0A087WQU7 115 aa7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 Igkv1-88A0A140T8N1 120 aa7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 Krtap24-1G3X9A2 248 aa7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 EnhoQ8K1D8 76 aa7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 Rbm3O89086 153 aaKnown RBP7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 Trav9n-4A0A075B631 113 aa7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 Shisa2Q8QZV2 295 aa7.72□□□□□ -1.17
Msh3-201ENSMUST00000022220 7530416G11RikJ3QJX6 159 aa7.71□□□□□ -1.17
Msh3-201ENSMUST00000022220 Vpreb1P13372 142 aa7.71□□□□□ -1.17
Msh3-201ENSMUST00000022220 Lamtor3O88653 124 aa7.71□□□□□ -1.17
Msh3-201ENSMUST00000022220 CrygeQ03740 174 aa7.71□□□□□ -1.18
Msh3-201ENSMUST00000022220 Sostdc1Q9CQN4 206 aa7.71□□□□□ -1.18
Msh3-201ENSMUST00000022220 Gm19935A0A1B0GSF9 52 aa7.71□□□□□ -1.18
Msh3-201ENSMUST00000022220 Ighv1-59A0A0A6YXE0 117 aa7.7□□□□□ -1.18
Msh3-201ENSMUST00000022220 Klk12B2RVZ0 247 aa7.7□□□□□ -1.18
Msh3-201ENSMUST00000022220 9530053A07RikE9PVG8 2581 aa7.7□□□□□ -1.18
Msh3-201ENSMUST00000022220 Igkv4-72A0A0B4J1I4 117 aa7.7□□□□□ -1.18
Msh3-201ENSMUST00000022220 Rpl39lQ9CQD0 51 aa7.69□□□□□ -1.18
Msh3-201ENSMUST00000022220 Igkv4-54A0A0G2JES9 117 aa7.69□□□□□ -1.18
Msh3-201ENSMUST00000022220 SmcpP15265 143 aa7.69□□□□□ -1.18
Msh3-201ENSMUST00000022220 Gm10577Q3UDV9 132 aa7.69□□□□□ -1.18
Msh3-201ENSMUST00000022220 Wfdc12Q9JHY3 85 aa7.69□□□□□ -1.18
Msh3-201ENSMUST00000022220 Igkv1-122A0A140T8M9 119 aa7.68□□□□□ -1.18
Msh3-201ENSMUST00000022220 Ormdl1Q921I0 153 aa7.68□□□□□ -1.18
Msh3-201ENSMUST00000022220 Fgf23Q9EPC2 251 aa7.68□□□□□ -1.18
Msh3-201ENSMUST00000022220 Itpr2Q9Z329 2701 aa7.67□□□□□ -1.18
Msh3-201ENSMUST00000022220 P01755 137 aa7.67□□□□□ -1.18
Msh3-201ENSMUST00000022220 Krtap27-1E9PX37 202 aa7.67□□□□□ -1.18
Msh3-201ENSMUST00000022220 Camk2n2Q78WH7 79 aa7.67□□□□□ -1.18
Msh3-201ENSMUST00000022220 Rpl28P41105 137 aaKnown RBP7.66□□□□□ -1.18
Msh3-201ENSMUST00000022220 Rps28P62858 69 aaKnown RBP7.66□□□□□ -1.18
Msh3-201ENSMUST00000022220 SnurfQ9WU12 71 aa7.66□□□□□ -1.18
Msh3-201ENSMUST00000022220 P06329 120 aa7.66□□□□□ -1.18
Msh3-201ENSMUST00000022220 Fam19a1Q7TPG8 133 aa7.66□□□□□ -1.18
Msh3-201ENSMUST00000022220 Trbv13-2A0A140T8N6 113 aa7.66□□□□□ -1.18
Msh3-201ENSMUST00000022220 Igkv1-117A0A140T8M0 119 aa7.65□□□□□ -1.18
Msh3-201ENSMUST00000022220 Cdc42se2Q8BGH7 84 aa7.65□□□□□ -1.18
Msh3-201ENSMUST00000022220 Chchd7Q8K2Q5 85 aa7.65□□□□□ -1.18
Msh3-201ENSMUST00000022220 Defb10Q8R2I8 73 aa7.65□□□□□ -1.18
Msh3-201ENSMUST00000022220 Inafm2A0A1L1STD6 152 aa7.65□□□□□ -1.18
Msh3-201ENSMUST00000022220 Tmem223Q9CQE2 199 aaKnown RBP7.65□□□□□ -1.18
Msh3-201ENSMUST00000022220 Stab2Q8R4U0 2559 aa7.65□□□□□ -1.19
Msh3-201ENSMUST00000022220 Ufsp1Q9CZP0 217 aa7.65□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm884A2A9H6 3643 aa7.63□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm10337F7DEP7 55 aa7.63□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm10549Q3URY4 149 aa7.63□□□□□ -1.19
Msh3-201ENSMUST00000022220 Dph3Q8K0W9 82 aa7.62□□□□□ -1.19
Msh3-201ENSMUST00000022220 Tenm3Q9WTS6 2715 aa7.62□□□□□ -1.19
Msh3-201ENSMUST00000022220 4930546C10RikE9Q4Y3 121 aa7.61□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm7137J3QMW1 236 aa7.61□□□□□ -1.19
Msh3-201ENSMUST00000022220 Spink8Q09TK9 105 aa7.61□□□□□ -1.19
Msh3-201ENSMUST00000022220 Cox7b2Q9D2H1 82 aa7.6□□□□□ -1.19
Msh3-201ENSMUST00000022220 Tfpi2O35536 230 aa7.6□□□□□ -1.19
Msh3-201ENSMUST00000022220 A0A286YE02 88 aa7.6□□□□□ -1.19
Msh3-201ENSMUST00000022220 Helz2E9QAM5 2947 aaKnown RBP7.6□□□□□ -1.19
Msh3-201ENSMUST00000022220 Rnf152Q8BG47 203 aa7.59□□□□□ -1.19
Msh3-201ENSMUST00000022220 9430015G10RikA2ASP7 199 aa7.59□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm7138L7N2C3 230 aa7.59□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm3238W4VSP7 230 aa7.59□□□□□ -1.19
Msh3-201ENSMUST00000022220 Gm5142Q8C5X9 133 aa7.59□□□□□ -1.19
Msh3-201ENSMUST00000022220 Ube2d4D3YUH6 135 aa7.59□□□□□ -1.2
Msh3-201ENSMUST00000022220 Gpha2Q925Q5 128 aa7.58□□□□□ -1.2
Msh3-201ENSMUST00000022220 Gm17577J3QNF7 156 aa7.58□□□□□ -1.2
Msh3-201ENSMUST00000022220 Gm10845Q3UNY9 185 aa7.58□□□□□ -1.2
Msh3-201ENSMUST00000022220 Plac8l1Q08EJ0 177 aa7.58□□□□□ -1.2
Msh3-201ENSMUST00000022220 Pdzd2E9Q1M1 2796 aa7.57□□□□□ -1.2
Msh3-201ENSMUST00000022220 BC048502Q80Y74 154 aa7.57□□□□□ -1.2
Msh3-201ENSMUST00000022220 Sfta2E9PXB6 77 aa7.57□□□□□ -1.2
Msh3-201ENSMUST00000022220 PscaP57096 123 aa7.56□□□□□ -1.2
Msh3-201ENSMUST00000022220 Ube2bP63147 152 aa7.56□□□□□ -1.2
Msh3-201ENSMUST00000022220 Zfhx3Q61329 3726 aa7.56□□□□□ -1.2
Msh3-201ENSMUST00000022220 Vpreb2P13373 142 aa7.56□□□□□ -1.2
Msh3-201ENSMUST00000022220 H2al1aQ5M8Q2 105 aa7.56□□□□□ -1.2
Msh3-201ENSMUST00000022220 Muc4Q8JZM8 3443 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Ntn5Q3UQ22 452 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Serp1Q9Z1W5 66 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Krtap16-1A2A5X5 502 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Defb12Q8K4N3 78 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Krtap26-1Q9D7N2 215 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Igkv8-18A0A0B4J1J3 123 aa7.55□□□□□ -1.2
Msh3-201ENSMUST00000022220 Lypd5Q9D7Z7 256 aa7.54□□□□□ -1.2
Msh3-201ENSMUST00000022220 Igkv8-26A0A075B5N5 123 aa7.54□□□□□ -1.2
Msh3-201ENSMUST00000022220 Igkv4-58A0A0G2JGI6 119 aa7.54□□□□□ -1.2
Msh3-201ENSMUST00000022220 Spink4O35679 86 aa7.54□□□□□ -1.2
Msh3-201ENSMUST00000022220 4930519P11RikQ9CUJ8 166 aa7.54□□□□□ -1.2
Msh3-201ENSMUST00000022220 Svep1A2AVA0 3567 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 Ighv1-56A0A0A6YXG2 117 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 Ifitm6A0A1B0GS75 124 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 U90926O08546 118 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 Gm5153P01627 120 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 Cystm1Q8K353 104 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 Ndufc1Q9CQY9 76 aa7.53□□□□□ -1.2
Msh3-201ENSMUST00000022220 1700012A03RikQ9DAF1 130 aa7.52□□□□□ -1.21
Msh3-201ENSMUST00000022220 Fam19a3Q7TPG6 132 aa7.51□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms