RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Gm10549Q3URY4 149 aa12.24□□□□□ -0.45
Ckap4-202ENSMUST00000167671 D130052B06RikQ3UW13 202 aa12.24□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Rpl28P41105 137 aaKnown RBP12.24□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Xcl1P47993 114 aa12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Defb26Q30KN7 186 aa12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 MtorQ9JLN9 2549 aa12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 FlnaQ8BTM8 2647 aaKnown RBP12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Trav13-1A0A075B644 110 aa12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Defb50Q6TU36 73 aa12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Tm2d2Q8R0I4 213 aa12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Hectd1Q69ZR2 2618 aaKnown RBP12.23□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Trav13n-2A0A0G2JF93 110 aa12.22□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Igkv6-13A0A0G2JGY3 119 aa12.22□□□□□ -0.45
Ckap4-202ENSMUST00000167671 SmcpP15265 143 aa12.22□□□□□ -0.45
Ckap4-202ENSMUST00000167671 BsnO88737 3942 aa12.21□□□□□ -0.45
Ckap4-202ENSMUST00000167671 Igf1P05017 153 aa12.2□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Prh1P05142 261 aa12.2□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Zfand2aQ9JII7 171 aa12.2□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Brwd1Q921C3 2304 aa12.19□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Gpha2Q925Q5 128 aa12.19□□□□□ -0.46
Ckap4-202ENSMUST00000167671 MobpQ9D2P8 170 aa12.19□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Gm16381A0A1Y7VKT9 73 aa12.19□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Prss58Q8BW11 241 aa12.19□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Dnal4Q9DCM4 105 aa12.19□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Ighv8-11A0A075B5X4 119 aa12.18□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Znf414Q9DCK4 299 aa12.18□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Tenm3Q9WTS6 2715 aa12.18□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Igkv1-99F6XWB2 120 aa12.18□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Usp24B1AY13 2617 aaKnown RBP12.17□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Gm7102J3QQ10 178 aa12.17□□□□□ -0.46
Ckap4-202ENSMUST00000167671 C2cd3Q52KB6 2323 aa12.17□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Hbb-b2P02089 147 aa12.17□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Akap13E9Q394 2776 aa12.16□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Gm20726G3UX18 150 aa12.16□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Mzt1Q8BUR9 78 aa12.16□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Chchd7Q8K2Q5 85 aa12.16□□□□□ -0.46
Ckap4-202ENSMUST00000167671 Ighv2-9-1A0A075B697 116 aa12.14□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Spata25Q9DA57 226 aa12.14□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Pla2g1bQ9Z0Y2 146 aa12.14□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Acyp1P56376 99 aa12.13□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Igkv4-72A0A0B4J1I4 117 aa12.13□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Usp9yF8VPU6 2556 aa12.12□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Gm3618D3Z4P5 127 aa12.12□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Gm2916Q9D9B9 127 aa12.12□□□□□ -0.47
Ckap4-202ENSMUST00000167671 NipblQ6KCD5 2798 aaKnown RBP12.11□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Krtap16-1A2A5X5 502 aa12.11□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Lyrm9Q3UN90 78 aa12.11□□□□□ -0.47
Ckap4-202ENSMUST00000167671 ScxQ64124 207 aa12.1□□□□□ -0.47
Ckap4-202ENSMUST00000167671 4930519P11RikQ9CUJ8 166 aa12.1□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Hspg2Q05793 3707 aaKnown RBP12.1□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Zfp951A0A087WRH0 451 aa12.1□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Il19Q8CJ70 176 aa12.1□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Gm5142Q8C5X9 133 aa12.09□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Trav13-2A0A075B649 110 aa12.08□□□□□ -0.47
Ckap4-202ENSMUST00000167671 1810062G17RikG3X8Y2 129 aa12.08□□□□□ -0.47
Ckap4-202ENSMUST00000167671 Zfp462B1AWL2 2495 aaKnown RBP12.08□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Rpl39lQ9CQD0 51 aa12.08□□□□□ -0.48
Ckap4-202ENSMUST00000167671 4930535I16RikQ9CUI2 172 aa12.08□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Ankrd11E9Q4F7 2643 aa12.08□□□□□ -0.48
Ckap4-202ENSMUST00000167671 2010109I03RikQ9CQ11 111 aa12.07□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Epg5Q80TA9 2572 aa12.07□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Ighv1-56A0A0A6YXG2 117 aa12.07□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Igkv4-53A0A0G2JFC6 119 aa12.07□□□□□ -0.48
Ckap4-202ENSMUST00000167671 7530416G11RikJ3QJX6 159 aa12.06□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Ly6c2P0CW03 131 aa12.06□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Defa7P50705 93 aa12.06□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Igkv2-109A0A075B5K6 120 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Scgb1b2O35176 93 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Dand5Q76LW6 185 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Ifitm6A0A1B0GS75 124 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Defa4P28311 92 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Smim26Q3V460 107 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Cystm1Q8K353 104 aa12.05□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Defb2P82020 71 aa12.04□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Klk12B2RVZ0 247 aa12.03□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Cd99Q8VCN6 175 aa12.03□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Naa38Q9D2U5 125 aa12.03□□□□□ -0.48
Ckap4-202ENSMUST00000167671 MifP34884 115 aaKnown RBP12.03□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Odf3l2Q3TZ65 277 aa12.03□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Ank2Q8C8R3 3898 aa12.02□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Col7a1Q63870 2944 aa12.02□□□□□ -0.48
Ckap4-202ENSMUST00000167671 Igkv4-54A0A0G2JES9 117 aa12.02□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Spink4O35679 86 aa12.02□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Hist1h4aP62806 103 aaKnown RBP12.02□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Unc79Q0KK59 2596 aa12.01□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Defa20Q45VN2 95 aa12□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Myo18bE9PV66 2605 aa12□□□□□ -0.49
Ckap4-202ENSMUST00000167671 PrcdQ00LT2 53 aa12□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Defa21Q8C1P2 93 aa12□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Setd2E9Q5F9 2537 aa12□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Gm43218A0A0G2JGT0 114 aa11.99□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Rpl18aP62717 176 aaKnown RBP11.99□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Igkv8-18A0A0B4J1J3 123 aa11.99□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Leap2Q91V13 76 aa11.99□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Trav9n-4A0A075B631 113 aa11.98□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Gm10845Q3UNY9 185 aa11.98□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Klk11Q9QYN3 276 aa11.98□□□□□ -0.49
Ckap4-202ENSMUST00000167671 TrrapQ80YV3 2565 aaKnown RBP11.98□□□□□ -0.49
Ckap4-202ENSMUST00000167671 Gm5153P01627 120 aa11.98□□□□□ -0.49
Ckap4-202ENSMUST00000167671 4930518I15RikQ3V2W7 57 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms