RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 NischQ80TM9 1593 aa32.21■■■□□ 2.75
Ckap4-202ENSMUST00000167671 Abcc9P70170 1546 aa31.21■■■□□ 2.59
Ckap4-202ENSMUST00000167671 Gm35339A0A140LHH9 1649 aa31.16■■■□□ 2.58
Ckap4-202ENSMUST00000167671 Rhox8Q6VSS7 320 aa30.76■■■□□ 2.51
Ckap4-202ENSMUST00000167671 Abcc8B2RUS7 1588 aa30.39■■■□□ 2.45
Ckap4-202ENSMUST00000167671 Rtl1Q7M732 1744 aa30.17■■■□□ 2.42
Ckap4-202ENSMUST00000167671 Ccdc180J3QNE4 1664 aa29.84■■■□□ 2.37
Ckap4-202ENSMUST00000167671 Rpgrip1Q9EPQ2 1331 aa29.17■■■□□ 2.26
Ckap4-202ENSMUST00000167671 Zcchc6Q5BLK4 1491 aaKnown RBP29.09■■■□□ 2.25
Ckap4-202ENSMUST00000167671 Ehmt2Q9Z148 1263 aaKnown RBP28.76■■■□□ 2.19
Ckap4-202ENSMUST00000167671 Acin1Q9JIX8 1338 aaKnown RBP28.7■■■□□ 2.18
Ckap4-202ENSMUST00000167671 Ccdc136Q3TVA9 1136 aa28.49■■■□□ 2.15
Ckap4-202ENSMUST00000167671 HrcG5E8J6 738 aa28.41■■■□□ 2.14
Ckap4-202ENSMUST00000167671 Rb1cc1Q9ESK9 1588 aa28.29■■■□□ 2.12
Ckap4-202ENSMUST00000167671 Dcaf1Q80TR8 1506 aa28.23■■■□□ 2.11
Ckap4-202ENSMUST00000167671 ScribQ80U72 1612 aa28.12■■■□□ 2.09
Ckap4-202ENSMUST00000167671 Trim41Q5NCC3 630 aa27.96■■■□□ 2.07
Ckap4-202ENSMUST00000167671 Baz1aO88379 1555 aa27.89■■■□□ 2.05
Ckap4-202ENSMUST00000167671 Pcgf6Q99NA9 353 aa27.88■■■□□ 2.05
Ckap4-202ENSMUST00000167671 Kdm5dQ62240 1548 aa27.74■■■□□ 2.03
Ckap4-202ENSMUST00000167671 Cep164Q5DU05 1446 aa27.45■■□□□ 1.99
Ckap4-202ENSMUST00000167671 Supt5hO55201 1082 aaKnown RBP27.38■■□□□ 1.97
Ckap4-202ENSMUST00000167671 NacadQ5SWP3 1504 aa27.37■■□□□ 1.97
Ckap4-202ENSMUST00000167671 Smarca2Q6DIC0 1577 aa27.28■■□□□ 1.96
Ckap4-202ENSMUST00000167671 Gab3Q8BSM5 595 aa27.2■■□□□ 1.94
Ckap4-202ENSMUST00000167671 Cngb1E1AZ71 1325 aa27.19■■□□□ 1.94
Ckap4-202ENSMUST00000167671 Chic1Q8CBW7 227 aa27.12■■□□□ 1.93
Ckap4-202ENSMUST00000167671 Crybg2B7ZCC2 1516 aa27.06■■□□□ 1.92
Ckap4-202ENSMUST00000167671 Rsf1E9PWW9 1441 aaKnown RBP27.04■■□□□ 1.92
Ckap4-202ENSMUST00000167671 Zeb1Q64318 1117 aa27■■□□□ 1.91
Ckap4-202ENSMUST00000167671 Neurod1Q60867 357 aa26.82■■□□□ 1.88
Ckap4-202ENSMUST00000167671 Ccdc88bQ4QRL3 1481 aa26.8■■□□□ 1.88
Ckap4-202ENSMUST00000167671 Mier1Q5UAK0 511 aa26.79■■□□□ 1.88
Ckap4-202ENSMUST00000167671 Sycp2Q9CUU3 1500 aa26.77■■□□□ 1.88
Ckap4-202ENSMUST00000167671 Brd4Q9ESU6 1400 aaKnown RBP26.73■■□□□ 1.87
Ckap4-202ENSMUST00000167671 NefmP08553 848 aa26.71■■□□□ 1.87
Ckap4-202ENSMUST00000167671 Cecr2E9Q2Z1 1453 aa26.68■■□□□ 1.86
Ckap4-202ENSMUST00000167671 Golga3P55937 1487 aa26.64■■□□□ 1.86
Ckap4-202ENSMUST00000167671 Sall2Q9QX96 1004 aa26.55■■□□□ 1.84
Ckap4-202ENSMUST00000167671 Synj1Q8CHC4 1574 aa26.52■■□□□ 1.84
Ckap4-202ENSMUST00000167671 Esf1Q3V1V3 845 aaKnown RBP26.52■■□□□ 1.84
Ckap4-202ENSMUST00000167671 UbtfP25976 765 aaKnown RBP26.35■■□□□ 1.81
Ckap4-202ENSMUST00000167671 CftrP26361 1476 aa26.25■■□□□ 1.79
Ckap4-202ENSMUST00000167671 Wdr66E9Q743 1299 aa26.22■■□□□ 1.79
Ckap4-202ENSMUST00000167671 Top2bQ64511 1612 aa26.18■■□□□ 1.78
Ckap4-202ENSMUST00000167671 Las1lA2BE28 776 aaKnown RBP26.17■■□□□ 1.78
Ckap4-202ENSMUST00000167671 BicraF8VPZ9 1578 aa26.16■■□□□ 1.78
Ckap4-202ENSMUST00000167671 Aebp2Q9Z248 504 aaKnown RBP26.13■■□□□ 1.77
Ckap4-202ENSMUST00000167671 Cc2d2aQ8CFW7 1633 aa26.09■■□□□ 1.77
Ckap4-202ENSMUST00000167671 Myt1lP97500 1187 aa26.08■■□□□ 1.77
Ckap4-202ENSMUST00000167671 Anks4bQ8K3X6 423 aa26.03■■□□□ 1.76
Ckap4-202ENSMUST00000167671 Ppargc1bQ8VHJ7 1014 aa26.03■■□□□ 1.76
Ckap4-202ENSMUST00000167671 Cttnbp2B9EJA2 1648 aa26.01■■□□□ 1.75
Ckap4-202ENSMUST00000167671 Rapgef2Q8CHG7 1496 aa25.98■■□□□ 1.75
Ckap4-202ENSMUST00000167671 Csrnp3P59055 597 aa25.98■■□□□ 1.75
Ckap4-202ENSMUST00000167671 1700123L14RikQ3V2K7 440 aa25.9■■□□□ 1.74
Ckap4-202ENSMUST00000167671 ClspnQ80YR7 1315 aa25.86■■□□□ 1.73
Ckap4-202ENSMUST00000167671 Cdk11bP24788 784 aaKnown RBP25.84■■□□□ 1.73
Ckap4-202ENSMUST00000167671 Cep162Q6ZQ06 1403 aa25.83■■□□□ 1.73
Ckap4-202ENSMUST00000167671 Nop58Q6DFW4 536 aaKnown RBP25.83■■□□□ 1.72
Ckap4-202ENSMUST00000167671 Npm2Q80W85 207 aa25.81■■□□□ 1.72
Ckap4-202ENSMUST00000167671 Fmn1Q05860 1466 aa25.8■■□□□ 1.72
Ckap4-202ENSMUST00000167671 Top2aQ01320 1528 aaKnown RBP25.78■■□□□ 1.72
Ckap4-202ENSMUST00000167671 TonslQ6NZL6 1363 aa25.75■■□□□ 1.71
Ckap4-202ENSMUST00000167671 Plekhg3Q4VAC9 1341 aa25.75■■□□□ 1.71
Ckap4-202ENSMUST00000167671 Smarca4Q3TKT4 1613 aaKnown RBP25.75■■□□□ 1.71
Ckap4-202ENSMUST00000167671 Clip1Q922J3 1391 aa25.64■■□□□ 1.7
Ckap4-202ENSMUST00000167671 Gm38655A0A286YDK6 273 aa25.46■■□□□ 1.67
Ckap4-202ENSMUST00000167671 Ncapd3Q6ZQK0 1506 aa25.44■■□□□ 1.66
Ckap4-202ENSMUST00000167671 Aplp2Q06335 707 aa25.42■■□□□ 1.66
Ckap4-202ENSMUST00000167671 Iqgap2Q3UQ44 1575 aa25.39■■□□□ 1.65
Ckap4-202ENSMUST00000167671 Ap3b1Q9Z1T1 1105 aa25.39■■□□□ 1.65
Ckap4-202ENSMUST00000167671 Eif4g1Q6NZJ6 1600 aaKnown RBP25.37■■□□□ 1.65
Ckap4-202ENSMUST00000167671 Eid3Q3V124 375 aa25.36■■□□□ 1.65
Ckap4-202ENSMUST00000167671 CenpbP27790 599 aa25.29■■□□□ 1.64
Ckap4-202ENSMUST00000167671 Arhgap35Q91YM2 1499 aa25.24■■□□□ 1.63
Ckap4-202ENSMUST00000167671 Il27Q8K3I6 234 aa25.22■■□□□ 1.63
Ckap4-202ENSMUST00000167671 Arap1Q4LDD4 1452 aa25.2■■□□□ 1.62
Ckap4-202ENSMUST00000167671 PtprkP35822 1457 aa25.19■■□□□ 1.62
Ckap4-202ENSMUST00000167671 Eea1Q8BL66 1411 aa25.17■■□□□ 1.62
Ckap4-202ENSMUST00000167671 TnnQ80Z71 1560 aa25.11■■□□□ 1.61
Ckap4-202ENSMUST00000167671 Setd5Q5XJV7 1441 aa25.11■■□□□ 1.61
Ckap4-202ENSMUST00000167671 Mapk8ip2Q9ERE9 830 aa25.08■■□□□ 1.61
Ckap4-202ENSMUST00000167671 Atad2bE9Q166 1460 aaKnown RBP25.06■■□□□ 1.6
Ckap4-202ENSMUST00000167671 Kdm5bQ80Y84 1544 aa25.04■■□□□ 1.6
Ckap4-202ENSMUST00000167671 Arhgef5E9Q7D5 1581 aa25.04■■□□□ 1.6
Ckap4-202ENSMUST00000167671 Hnrnpul2Q00PI9 745 aaKnown RBP25.03■■□□□ 1.6
Ckap4-202ENSMUST00000167671 NrkQ9R0G8 1455 aa25.03■■□□□ 1.6
Ckap4-202ENSMUST00000167671 Ccdc18Q640L5 1455 aa24.99■■□□□ 1.59
Ckap4-202ENSMUST00000167671 SafbD3YXK2 937 aaKnown RBP24.96■■□□□ 1.59
Ckap4-202ENSMUST00000167671 Fam50aQ9WV03 339 aaKnown RBP24.92■■□□□ 1.58
Ckap4-202ENSMUST00000167671 Baz1bQ9Z277 1479 aa24.91■■□□□ 1.58
Ckap4-202ENSMUST00000167671 BlmO88700 1416 aa24.91■■□□□ 1.58
Ckap4-202ENSMUST00000167671 Shroom4Q1W617 1475 aa24.89■■□□□ 1.58
Ckap4-202ENSMUST00000167671 Kif15Q6P9L6 1387 aa24.89■■□□□ 1.58
Ckap4-202ENSMUST00000167671 Tiam1Q60610 1591 aa24.87■■□□□ 1.57
Ckap4-202ENSMUST00000167671 Myt1Q8CFC2 1127 aa24.86■■□□□ 1.57
Ckap4-202ENSMUST00000167671 NclP09405 707 aaKnown RBP24.85■■□□□ 1.57
Ckap4-202ENSMUST00000167671 Tnnt3Q9QZ47 272 aa24.85■■□□□ 1.57
Ckap4-202ENSMUST00000167671 AqrQ8CFQ3 1481 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 118.7 ms