RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Igkv3-4A0A140T8Q4 119 aa11,94□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Fhl2O70433 279 aa11,94□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Fam19a3Q7TPG6 132 aa11,93□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Rai1Q61818 1889 aa11,93□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Adamts20P59511 1906 aa11,93□□□□□ -0,5
Col17a1-202ENSMUST00000086923 NrgnP60761 78 aa11,93□□□□□ -0,5
Col17a1-202ENSMUST00000086923 B230217C12RikE9Q3Z1 139 aa11,92□□□□□ -0,5
Col17a1-202ENSMUST00000086923 BC025920Q3US60 128 aa11,92□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Col4a6B1AVK5 1691 aa11,91□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Hcfc1Q61191 2045 aaKnown RBP11,91□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Znf580Q9DB38 172 aa11,91□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Tcf20Q9EPQ8 1987 aa11,9□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Cspg4Q8VHY0 2327 aa11,9□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Bean1Q9EQG5 255 aa11,9□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Sprr3O09116 238 aa11,9□□□□□ -0,5
Col17a1-202ENSMUST00000086923 Ighv1-56A0A0A6YXG2 117 aa11,89□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Hivep3A2A884 2348 aa11,89□□□□□ -0,51
Col17a1-202ENSMUST00000086923 TectaO08523 2155 aa11,89□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Gm10509O88255 85 aa11,89□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Pla2g2dQ9WVF6 144 aa11,89□□□□□ -0,51
Col17a1-202ENSMUST00000086923 2310034G01RikA0A286YDL3 209 aa11,87□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Shisa2Q8QZV2 295 aa11,87□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Sostdc1Q9CQN4 206 aa11,87□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Cd164l2Q9D6W7 172 aa11,86□□□□□ -0,51
Col17a1-202ENSMUST00000086923 6430550D23RikE9Q1X6 194 aa11,85□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Pip4p1Q3TWL2 284 aa11,85□□□□□ -0,51
Col17a1-202ENSMUST00000086923 C2cd3Q52KB6 2323 aa11,84□□□□□ -0,51
Col17a1-202ENSMUST00000086923 PlaurP35456 327 aa11,84□□□□□ -0,51
Col17a1-202ENSMUST00000086923 1700012A03RikQ9DAF1 130 aa11,84□□□□□ -0,51
Col17a1-202ENSMUST00000086923 Ly6gP35461 111 aa11,83□□□□□ -0,52
Col17a1-202ENSMUST00000086923 CrygfQ9CXV3 174 aa11,83□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Tcl1b5P56845 121 aa11,82□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Ighv2-5A0A0A6YY69 116 aa11,81□□□□□ -0,52
Col17a1-202ENSMUST00000086923 AcacbE9Q4Z2 2448 aa11,8□□□□□ -0,52
Col17a1-202ENSMUST00000086923 1700056E22RikF7CNM6 234 aa11,8□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Wfdc13Q5DQQ6 81 aa11,8□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Gm28374F6SG70 93 aa11,8□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Krtap27-1E9PX37 202 aa11,79□□□□□ -0,52
Col17a1-202ENSMUST00000086923 PtprbB2RU80 1998 aa11,79□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Odf3l2Q3TZ65 277 aa11,79□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Gm11213A0A1B0GR83 88 aa11,79□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Rif1Q6PR54 2419 aaKnown RBP11,78□□□□□ -0,52
Col17a1-202ENSMUST00000086923 E130114P18RikF6S0S7 154 aa11,78□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Rnase1P00683 149 aa11,78□□□□□ -0,52
Col17a1-202ENSMUST00000086923 3110070M22RikQ9DAQ7 118 aa11,77□□□□□ -0,52
Col17a1-202ENSMUST00000086923 Gm5464Q3UY29 175 aa11,77□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Wisp2Q9Z0G4 251 aa11,76□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Igkv8-21A0A140T8P7 120 aa11,76□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Chchd7Q8K2Q5 85 aa11,76□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Cdc42se1Q8BHL7 80 aa11,76□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Igkv3-12A0A140T8P0 119 aa11,75□□□□□ -0,53
Col17a1-202ENSMUST00000086923 E130116L18RikQ8BMV6 101 aa11,75□□□□□ -0,53
Col17a1-202ENSMUST00000086923 AI606181Q8C7B9 129 aa11,75□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Ncor1Q60974 2453 aa11,75□□□□□ -0,53
Col17a1-202ENSMUST00000086923 PrlhG3UWC3 86 aa11,75□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Q9DAA7 145 aa11,75□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Gm9925F6T2U3 160 aa11,74□□□□□ -0,53
Col17a1-202ENSMUST00000086923 DscamQ9ERC8 2013 aa11,74□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Ovol3D3YYM0 189 aa11,74□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Defb18Q30KP5 85 aa11,73□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Igkv8-30A0A140T8M3 121 aa11,73□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Gpha2Q925Q5 128 aa11,72□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Ighv2-2A0A075B5P8 116 aa11,72□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Nsun4C4P6S0 806 aaKnown RBP11,72□□□□□ -0,53
Col17a1-202ENSMUST00000086923 P01821 116 aa11,72□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Q9DAB9 146 aa11,71□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Gm10226O88253 85 aa11,71□□□□□ -0,53
Col17a1-202ENSMUST00000086923 Igkv8-27A0A0G2JF28 120 aa11,71□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Ighv2-9-1A0A075B697 116 aa11,7□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Gm10160F6Y577 67 aa11,7□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Gm26661M0QWV4 156 aa11,7□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Lmo4P61969 165 aa11,7□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Zfand2aQ9JII7 171 aa11,7□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Gm10308Q9CVR5 141 aa11,68□□□□□ -0,54
Col17a1-202ENSMUST00000086923 1110002E22RikE0CYV9 1786 aa11,68□□□□□ -0,54
Col17a1-202ENSMUST00000086923 NbasE9Q411 2356 aa11,68□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Gm9887F6RFI0 207 aa11,67□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Gm10643Q3URG9 111 aa11,67□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Reg3aO09037 175 aa11,66□□□□□ -0,54
Col17a1-202ENSMUST00000086923 C130032M10RikQ8C888 123 aa11,66□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Mrpl34Q99N91 92 aa11,66□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Limd2Q8BGB5 128 aa11,66□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Gm4707V9GXN5 68 aa11,65□□□□□ -0,54
Col17a1-202ENSMUST00000086923 Tns1E9Q0S6 1888 aaKnown RBP11,63□□□□□ -0,55
Col17a1-202ENSMUST00000086923 Defb42Q8BVB5 75 aa11,62□□□□□ -0,55
Col17a1-202ENSMUST00000086923 Coa5Q99M07 74 aa11,61□□□□□ -0,55
Col17a1-202ENSMUST00000086923 Defb37Q7TMD2 62 aa11,61□□□□□ -0,55
Col17a1-202ENSMUST00000086923 FshbQ60687 130 aa11,6□□□□□ -0,55
Col17a1-202ENSMUST00000086923 Gm17689B3GLJ4 109 aa11,59□□□□□ -0,55
Col17a1-202ENSMUST00000086923 AvpP35455 168 aa11,59□□□□□ -0,55
Col17a1-202ENSMUST00000086923 PtprqP0C5E4 2300 aa11,59□□□□□ -0,55
Col17a1-202ENSMUST00000086923 Pla2g1bQ9Z0Y2 146 aa11,59□□□□□ -0,55
Col17a1-202ENSMUST00000086923 Znf414Q9DCK4 299 aa11,58□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Cox6a2P43023 97 aa11,58□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Q8K1L6 76 aa11,58□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Gm20661K7N787 53 aa11,58□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Spg11Q3UHA3 2430 aa11,58□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Phxr4P15974 95 aa11,56□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Msrb1Q9JLC3 116 aa11,56□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Ccdc179J3QM76 67 aa11,56□□□□□ -0,56
Retrieved 100 of 22,080 RNA–protein pairs in 47,5 ms