RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 4930546C10RikE9Q4Y3 121 aa11.25□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Chchd7Q8K2Q5 85 aa11.25□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Defb29Q8BGW9 78 aa11.24□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Spry2Q9QXV8 315 aa11.24□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Fbn1Q61554 2873 aaKnown RBP11.24□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Xlr5cQ9JJR2 179 aa11.23□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Tenm1Q9WTS4 2731 aa11.23□□□□□ -0.61
Ckap4-201ENSMUST00000053871 GfyJ3KML8 504 aa11.23□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Erdr1J3QMM0 206 aa11.23□□□□□ -0.61
Ckap4-201ENSMUST00000053871 MalO09198 153 aa11.23□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Pglyrp4Q0VB07 374 aa11.23□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Wdr38Q9D994 303 aa11.22□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Ighv1-61P01749 117 aa11.22□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Gm904Q3V2L5 102 aa11.22□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Ndufa12Q7TMF3 145 aaKnown RBP11.22□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Notch1Q01705 2531 aa11.21□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Igkv4-54A0A0G2JES9 117 aa11.21□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Hivep1Q03172 2688 aa11.21□□□□□ -0.61
Ckap4-201ENSMUST00000053871 Trav13-1A0A075B644 110 aa11.21□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Igkv1-35A0A0G2JDE5 120 aa11.2□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Prss58Q8BW11 241 aa11.2□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Stab1Q8R4Y4 2571 aa11.2□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Igkv1-99F6XWB2 120 aa11.2□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Vmo1Q5SXG7 201 aa11.2□□□□□ -0.62
Ckap4-201ENSMUST00000053871 PemtQ61907 199 aa11.2□□□□□ -0.62
Ckap4-201ENSMUST00000053871 MobpQ9D2P8 170 aa11.19□□□□□ -0.62
Ckap4-201ENSMUST00000053871 9430069I07RikQ9CX21 111 aa11.19□□□□□ -0.62
Ckap4-201ENSMUST00000053871 PrcdQ00LT2 53 aa11.18□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Tm2d2Q8R0I4 213 aa11.18□□□□□ -0.62
Ckap4-201ENSMUST00000053871 FlnbQ80X90 2602 aaKnown RBP11.18□□□□□ -0.62
Ckap4-201ENSMUST00000053871 TeppQ6IMH0 216 aa11.17□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Igkv4-72A0A0B4J1I4 117 aa11.17□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Itpr2Q9Z329 2701 aa11.17□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Igkv4-53A0A0G2JFC6 119 aa11.16□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Igkv1-117A0A140T8M0 119 aa11.16□□□□□ -0.62
Ckap4-201ENSMUST00000053871 PolqQ8CGS6 2544 aa11.16□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Cops9Q3U898 57 aa11.16□□□□□ -0.62
Ckap4-201ENSMUST00000053871 Trav13n-2A0A0G2JF93 110 aa11.15□□□□□ -0.62
Ckap4-201ENSMUST00000053871 PtprqP0C5E4 2300 aa11.15□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Zfand2aQ9JII7 171 aa11.15□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Smrp1Q2MH31 260 aa11.14□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Notch2O35516 2470 aa11.14□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Defb50Q6TU36 73 aa11.14□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Q8R092 253 aa11.14□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Gm10577Q3UDV9 132 aa11.13□□□□□ -0.63
Ckap4-201ENSMUST00000053871 2010109I03RikQ9CQ11 111 aa11.13□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Lage3Q9CR70 148 aa11.13□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Trav13-2A0A075B649 110 aa11.12□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Igkv6-13A0A0G2JGY3 119 aa11.12□□□□□ -0.63
Ckap4-201ENSMUST00000053871 ApcQ61315 2845 aa11.12□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Spink4O35679 86 aa11.12□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Defa20Q45VN2 95 aa11.11□□□□□ -0.63
Ckap4-201ENSMUST00000053871 CrygfQ9CXV3 174 aa11.11□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Higd2aQ9CQJ1 106 aa11.1□□□□□ -0.63
Ckap4-201ENSMUST00000053871 D730001G18RikA0A087WQU7 115 aa11.1□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Zfp951A0A087WRH0 451 aa11.1□□□□□ -0.63
Ckap4-201ENSMUST00000053871 Trav14d-3-dv8A0A075B619 120 aa11.08□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Dad1P61804 113 aa11.08□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Trbv13-2A0A140T8N6 113 aa11.08□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Odf3l2Q3TZ65 277 aa11.08□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Foxc1Q61572 553 aa11.08□□□□□ -0.64
Ckap4-201ENSMUST00000053871 5730596B20RikQ8BQ08 205 aa11.08□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Ighv1-59A0A0A6YXE0 117 aa11.07□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Ss18l2Q9D174 77 aa11.07□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Defa1P11477 93 aa11.06□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Esm1Q9QYY7 184 aa11.06□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Trav9n-4A0A075B631 113 aa11.06□□□□□ -0.64
Ckap4-201ENSMUST00000053871 A830031A19RikQ8BNT5 113 aa11.06□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Nhlrc1Q8BR37 401 aa11.06□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Igkv4-61A0A0G2JH00 117 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 CrygdP04342 174 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 MifP34884 115 aaKnown RBP11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 CrygeQ03740 174 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Gm10549Q3URY4 149 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 4930524J08RikQ9CUJ5 163 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Dnal4Q9DCM4 105 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Wfdc12Q9JHY3 85 aa11.05□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Gm7102J3QQ10 178 aa11.04□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Rpl28P41105 137 aaKnown RBP11.04□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Prr13Q9CQJ5 137 aa11.04□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Nsd1O88491 2588 aaKnown RBP11.04□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Gm16381A0A1Y7VKT9 73 aa11.03□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Gm43218A0A0G2JGT0 114 aa11.03□□□□□ -0.64
Ckap4-201ENSMUST00000053871 Igkv3-9A0A140T8P4 119 aa11.02□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Tmem86bQ497J1 226 aa11.01□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Trav3-4A0A075B654 114 aa11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Col6a5A6H584 2640 aa11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Srrm2Q8BTI8 2703 aaKnown RBP11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Igkv8-16A0A0G2JDG9 121 aa11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Igkv8-24A0A140T8P5 121 aa11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Klk12B2RVZ0 247 aa11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Tmem223Q9CQE2 199 aaKnown RBP11□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Klk11Q9QYN3 276 aa10.99□□□□□ -0.65
Ckap4-201ENSMUST00000053871 MrapQ9D159 127 aa10.98□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Ighv2-9-1A0A075B697 116 aa10.98□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Gm10518F6UQQ9 182 aa10.98□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Gm5142Q8C5X9 133 aa10.98□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Igkv2-109A0A075B5K6 120 aa10.97□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Gm7138L7N2C3 230 aa10.97□□□□□ -0.65
Ckap4-201ENSMUST00000053871 Gm3238W4VSP7 230 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 169.5 ms