RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 A130051J06RikQ8CAU1 227 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Lyzl4Q9D925 145 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Mlst8Q9DCJ1 326 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Lst1O08843 95 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Gp9O88186 177 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Morn5Q9DAI9 170 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Ighv8-5A0A0A6YY60 119 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Igkv4-69A0A0B4J1I6 116 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Ighv1-82A0A0G2JEU7 117 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 A030003K21RikA0A1Y7VIM3 128 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 BC048562Q80ZQ7 204 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Gm9508A0A1W2P7W0 230 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 P01753 117 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Q9D131 166 aa5.03□□□□□ -1.6
Bdnf-201ENSMUST00000053317 Igkv1-35A0A0G2JDE5 120 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm17349F7BGH6 99 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Trav14-1A0A0G2JF94 121 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 P01728 117 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 AngP21570 145 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 PemtQ61907 199 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Pou2af1Q64693 256 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm10295Q8CCF3 114 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Atp5g1Q9CR84 136 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 TgO08710 2766 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Inafm2A0A1L1STD6 152 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Tmem14cQ9CQN6 114 aa5.02□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ighv1-53A0A075B5W3 117 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 D730001G18RikA0A087WQU7 115 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ighv8-12A0A0G2JDE1 119 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Trav13n-1A0A0G2JEU8 110 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 LhbO09108 141 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ighv1-5A0A0A6YWG2 117 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Tmem254aP0DN89 123 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Tmem254bP0DN90 123 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Tmem254cP0DN91 123 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Lage3Q9CR70 148 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 4930442H23RikQ9D5G7 103 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ighv1-23A0A0A6YVW3 117 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 OdaphJ3QNT8 126 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Edn1P22387 202 aa5.01□□□□□ -1.61
Bdnf-201ENSMUST00000053317 P84751 237 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Fam19a4Q7TPG5 135 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Lypd6Q8BPP5 171 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Tmem263Q9DAM7 115 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Obox8V9GWY9 217 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Trav9d-3A0A075B695 113 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ighv2-6A0A075B6A7 116 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv8-16A0A0G2JDG9 121 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 P01729 129 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv2-109A0A075B5K6 120 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm10337F7DEP7 55 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 P01747 120 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Rnf152Q8BG47 203 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm9922Q8C3P1 144 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 4930535I16RikQ9CUI2 172 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Reg3dQ9QUS9 175 aa5□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv4-78A0A0A6YYE5 119 aa4.99□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Trav13n-2A0A0G2JF93 110 aa4.99□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Egr2P08152 470 aa4.99□□□□□ -1.61
Bdnf-201ENSMUST00000053317 P18527 97 aa4.99□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv4-79A0A075B5L8 119 aa4.99□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv8-24A0A140T8P5 121 aa4.99□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Sh2d1aO88890 126 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Defb42Q8BVB5 75 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv8-34A0A0G2JDU0 121 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm21060J3KMU4 56 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm10647E9Q8X0 124 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Prh1P05142 261 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Dph3Q8K0W9 82 aa4.98□□□□□ -1.61
Bdnf-201ENSMUST00000053317 C1qcQ02105 246 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm5468Q8C3D3 155 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Fam19a5Q91WE9 132 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Timm17bQ9Z0V7 172 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv4-74A0A0B4J1I3 119 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Igkv1-99F6XWB2 120 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Gm4861Q8C5A4 106 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ighv8-11A0A075B5X4 119 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Serp2Q6TAW2 65 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 Ndufs5Q99LY9 106 aa4.97□□□□□ -1.61
Bdnf-201ENSMUST00000053317 NpwA0A1L1STR8 176 aa4.96□□□□□ -1.61
Bdnf-201ENSMUST00000053317 EnhoQ8K1D8 76 aa4.96□□□□□ -1.61
Bdnf-201ENSMUST00000053317 AW146154Q3TPQ7 468 aa4.96□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Igkv1-122A0A140T8M9 119 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Klk12B2RVZ0 247 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm5878E9PUB3 99 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Cox7a1P56392 80 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Ormdl1Q921I0 153 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Trav13-1A0A075B644 110 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 6430550D23RikE9Q1X6 194 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 4930432M17RikQ3V0W9 174 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Odf1Q61999 247 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Rpl18aP62717 176 aaKnown RBP4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Vmo1Q5SXG7 201 aa4.95□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Trav4-3A0A0B4J1K1 110 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm20604F8WIA3 75 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Znf239P24399 201 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Ndufs7Q9DC70 224 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Spink13Q3UTS8 97 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Csdc2Q91YQ3 154 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 SptssbQ925E8 76 aa4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms