RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Tmem254bP0DN90 123 aa13.2□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Tmem254cP0DN91 123 aa13.2□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Defb13Q8R2I4 64 aa13.2□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Wfdc13Q5DQQ6 81 aa13.2□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Ighv10-3A0A075B5T6 119 aa13.19□□□□□ -0.3
Scaf11-201ENSMUST00000047835 CtrlQ9ER05 264 aa13.18□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Igf1P05017 153 aa13.17□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Smim1P0C8K7 78 aa13.17□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Defb40Q70KL2 73 aa13.17□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Krtap27-1E9PX37 202 aa13.17□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Gm3250E9Q1M3 230 aa13.17□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Rtl10D3YWW5 146 aa13.16□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Q9DAB9 146 aa13.16□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Igkv1-110A0A0B4J1I0 119 aa13.16□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Brk1Q91VR8 75 aa13.16□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Tcl1b5P56845 121 aa13.15□□□□□ -0.3
Scaf11-201ENSMUST00000047835 BtcQ05928 177 aa13.14□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Col5a1O88207 1838 aa13.14□□□□□ -0.31
Scaf11-201ENSMUST00000047835 SrarpQ3ULG3 163 aa13.14□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Tmem258P61166 79 aa13.13□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Gm11011D3Z3L9 86 aa13.13□□□□□ -0.31
Scaf11-201ENSMUST00000047835 EnhoQ8K1D8 76 aa13.12□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Srsf12Q8C8K3 266 aa13.12□□□□□ -0.31
Scaf11-201ENSMUST00000047835 TrrapQ80YV3 2565 aaKnown RBP13.11□□□□□ -0.31
Scaf11-201ENSMUST00000047835 P06320 134 aa13.11□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Klk9Q32M27 251 aa13.11□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Ighv2-9-1A0A075B697 116 aa13.1□□□□□ -0.31
Scaf11-201ENSMUST00000047835 1600014C23RikQ9DAX4 101 aa13.1□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Nav3Q80TN7 2359 aa13.1□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Arhgap32Q811P8 2089 aa13.1□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Ighv8-13A0A075B5Y0 101 aa13.1□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Usp9xP70398 2559 aaKnown RBP13.09□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Rnf152Q8BG47 203 aa13.09□□□□□ -0.31
Scaf11-201ENSMUST00000047835 Rpl28P41105 137 aaKnown RBP13.08□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Gm1968Q3T9I3 115 aa13.08□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Gm16485Q8C4B7 115 aa13.08□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Gm42715A0A087WP63 3095 aaKnown RBP13.08□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Ighv8-11A0A075B5X4 119 aa13.07□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Gm10577Q3UDV9 132 aa13.07□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Q8K1L6 76 aa13.07□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Atp5eP56382 52 aa13.06□□□□□ -0.32
Scaf11-201ENSMUST00000047835 TroQ6DIC6 2087 aa13.06□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Trav14-1A0A0G2JF94 121 aa13.05□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Ighv2-9A0A075B5Q5 116 aa13.04□□□□□ -0.32
Scaf11-201ENSMUST00000047835 A830031A19RikQ8BNT5 113 aa13.04□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Znf580Q9DB38 172 aa13.03□□□□□ -0.32
Scaf11-201ENSMUST00000047835 UtrnE9Q6R7 3430 aa13.03□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Adm2Q7TNK8 150 aa13.03□□□□□ -0.32
Scaf11-201ENSMUST00000047835 Igkv8-30A0A140T8M3 121 aa13.01□□□□□ -0.33
Scaf11-201ENSMUST00000047835 TeppQ6IMH0 216 aa13.01□□□□□ -0.33
Scaf11-201ENSMUST00000047835 4930556J24RikQ9D4U7 146 aa13.01□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Wdr38Q9D994 303 aa13□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Znf706Q9D115 76 aaKnown RBP13□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Bahcc1Q3UHR0 2643 aa13□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Igkv3-12A0A140T8P0 119 aa13□□□□□ -0.33
Scaf11-201ENSMUST00000047835 CdsnQ7TPC1 561 aa13□□□□□ -0.33
Scaf11-201ENSMUST00000047835 SptssbQ925E8 76 aa12.99□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Gm28374F6SG70 93 aa12.99□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Wfdc3Q14AE4 130 aa12.99□□□□□ -0.33
Scaf11-201ENSMUST00000047835 BaalcQ8VHV1 145 aa12.98□□□□□ -0.33
Scaf11-201ENSMUST00000047835 4930432M17RikQ3V0W9 174 aa12.98□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Ep400Q8CHI8 3072 aaKnown RBP12.97□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Krtap24-1G3X9A2 248 aa12.96□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Odf3l2Q3TZ65 277 aa12.96□□□□□ -0.33
Scaf11-201ENSMUST00000047835 Gm17509Q9CZ61 145 aa12.96□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Hivep3A2A884 2348 aa12.94□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Gm5142Q8C5X9 133 aa12.94□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Ndufc1Q9CQY9 76 aa12.94□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Vpreb2P13373 142 aa12.94□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Zfp462B1AWL2 2495 aaKnown RBP12.94□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Ifitm6A0A1B0GS75 124 aa12.9□□□□□ -0.34
Scaf11-201ENSMUST00000047835 Gm20604F8WIA3 75 aa12.88□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Smim20D3Z7Q2 69 aa12.88□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Tmem213Q08EA8 116 aa12.87□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Gm5153P01627 120 aa12.87□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Crip3Q6Q6R3 243 aa12.87□□□□□ -0.35
Scaf11-201ENSMUST00000047835 4930524J08RikQ9CUJ5 163 aa12.86□□□□□ -0.35
Scaf11-201ENSMUST00000047835 BC025920Q3US60 128 aa12.86□□□□□ -0.35
Scaf11-201ENSMUST00000047835 NpwA0A1L1STR8 176 aa12.86□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Defb11Q8R2I7 77 aa12.86□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Crip2Q9DCT8 208 aaKnown RBP12.85□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Sec61gP60060 68 aa12.85□□□□□ -0.35
Scaf11-201ENSMUST00000047835 2310009B15RikA0A0A6YWI4 143 aa12.84□□□□□ -0.35
Scaf11-201ENSMUST00000047835 PcntP48725 2898 aa12.84□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Zfand2aQ9JII7 171 aa12.84□□□□□ -0.35
Scaf11-201ENSMUST00000047835 Igkv8-28A0A0G2JE47 121 aa12.82□□□□□ -0.36
Scaf11-201ENSMUST00000047835 A0A286YE49 62 aa12.81□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Atox1O08997 68 aaKnown RBP12.81□□□□□ -0.36
Scaf11-201ENSMUST00000047835 MtorQ9JLN9 2549 aa12.81□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Psmb11Q8BG41 302 aa12.81□□□□□ -0.36
Scaf11-201ENSMUST00000047835 A730009L09RikA0A1B0GS82 72 aa12.8□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Setd2E9Q5F9 2537 aa12.78□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Defb38Q7TNV7 63 aa12.78□□□□□ -0.36
Scaf11-201ENSMUST00000047835 CenpwQ3URR0 86 aa12.78□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Gm10267M0QWD8 85 aa12.78□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Ntn5Q3UQ22 452 aa12.78□□□□□ -0.36
Scaf11-201ENSMUST00000047835 C130032M10RikQ8C888 123 aa12.78□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Gm16181B0V2H2 73 aa12.77□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Sprr2jO70561 109 aa12.77□□□□□ -0.36
Scaf11-201ENSMUST00000047835 Gm10135F6TEE5 83 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 105.3 ms