RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 SrarpQ3ULG3 163 aa12.06□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Defb13Q8R2I4 64 aa12.06□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Bahcc1Q3UHR0 2643 aa12.05□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 MtorQ9JLN9 2549 aa12.05□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Gm3443F7CCV5 94 aa12.05□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Q9DAB9 146 aa12.05□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Igkv4-92A0A0B4J1I2 117 aa12.04□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Gm12057A0A087WR21 115 aa12.04□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Gm28539A0A087WSL9 92 aa12.04□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Rnf152Q8BG47 203 aa12.04□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 4930535I16RikQ9CUI2 172 aa12.04□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 P06329 120 aa12.03□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 Krtap27-1E9PX37 202 aa12.02□□□□□ -0.48
Ubfd1-201ENSMUST00000033158 PtprbB2RU80 1998 aa12.02□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Gm42715A0A087WP63 3095 aaKnown RBP12.02□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 ScxQ64124 207 aa12.02□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 5730596B20RikQ8BQ08 205 aa12.02□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Trbv13-2A0A140T8N6 113 aa12.01□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Prr9Q8BV84 116 aa12.01□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Ighv2-9-1A0A075B697 116 aa12.01□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 SptssbQ925E8 76 aa12.01□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Gm3285A0A1W2P7U0 201 aa12□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Q8K1L6 76 aa12□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Gm9573F7C950 1606 aa12□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Igkv8-21A0A140T8P7 120 aa12□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 SycnQ8VCK7 134 aa12□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Nupr2Q497P3 102 aa11.99□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Igkv1-110A0A0B4J1I0 119 aa11.99□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Igkv1-117A0A140T8M0 119 aa11.98□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 BaalcQ8VHV1 145 aa11.98□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Tcl1b5P56845 121 aa11.98□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Ep400Q8CHI8 3072 aaKnown RBP11.97□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Rtl10D3YWW5 146 aa11.97□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Gm20604F8WIA3 75 aa11.97□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 CrygeQ03740 174 aa11.97□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Ighv8-11A0A075B5X4 119 aa11.97□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Lrp4Q8VI56 1905 aa11.97□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Gm5464Q3UY29 175 aa11.96□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Gpha2Q925Q5 128 aa11.96□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Ighv10-3A0A075B5T6 119 aa11.96□□□□□ -0.49
Ubfd1-201ENSMUST00000033158 Cd164l2Q9D6W7 172 aa11.95□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Serp2Q6TAW2 65 aa11.95□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 D730001G18RikA0A087WQU7 115 aa11.94□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Defb40Q70KL2 73 aa11.94□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 4930556J24RikQ9D4U7 146 aa11.94□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Gm11011D3Z3L9 86 aa11.93□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Atox1O08997 68 aaKnown RBP11.92□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Kiaa1549Q68FD9 1940 aa11.92□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Shisa2Q8QZV2 295 aa11.92□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Vpreb1P13372 142 aa11.92□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Trav14-1A0A0G2JF94 121 aa11.91□□□□□ -0.5
Ubfd1-201ENSMUST00000033158 Rpl28P41105 137 aaKnown RBP11.89□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Crip3Q6Q6R3 243 aa11.89□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 4930524J08RikQ9CUJ5 163 aa11.89□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 PcntP48725 2898 aa11.89□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Wfdc13Q5DQQ6 81 aa11.89□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Sec61gP60060 68 aa11.88□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Gm5142Q8C5X9 133 aa11.87□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 4930432M17RikQ3V0W9 174 aa11.86□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Myo18bE9PV66 2605 aa11.86□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 CdsnQ7TPC1 561 aa11.86□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Pou2af1Q64693 256 aa11.85□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Bri3P28662 125 aa11.84□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Znf706Q9D115 76 aaKnown RBP11.84□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Znf580Q9DB38 172 aa11.84□□□□□ -0.51
Ubfd1-201ENSMUST00000033158 Abca12E9Q876 2595 aa11.83□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Gm10845Q3UNY9 185 aa11.83□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Sox16Q62247 57 aa11.82□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 UtrnE9Q6R7 3430 aa11.82□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Epg5Q80TA9 2572 aa11.82□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 BC025920Q3US60 128 aa11.81□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 H2al1bA0A087WP11 105 aa11.81□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Ifitm6A0A1B0GS75 124 aa11.81□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Ighv8-13A0A075B5Y0 101 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 A0A286YE49 62 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 CenpwQ3URR0 86 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Gm10300Q8C8P7 189 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Unc79Q0KK59 2596 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Sprr2jO70561 109 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Gm10549Q3URY4 149 aa11.8□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Col27a1Q5QNQ9 1845 aa11.79□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 SvipQ3UZP4 77 aa11.79□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Ndufs5Q99LY9 106 aa11.78□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Defb10Q8R2I8 73 aa11.78□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Ighv2-9A0A075B5Q5 116 aa11.77□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 Odf3l2Q3TZ65 277 aa11.77□□□□□ -0.52
Ubfd1-201ENSMUST00000033158 TeppQ6IMH0 216 aa11.77□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Igkv3-12A0A140T8P0 119 aa11.76□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Igkv8-30A0A140T8M3 121 aa11.76□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Gm10135F6TEE5 83 aa11.76□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 2310009B15RikA0A0A6YWI4 143 aa11.76□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Zfand2aQ9JII7 171 aa11.76□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Psmb11Q8BG41 302 aa11.75□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Gm17509Q9CZ61 145 aa11.75□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Spink13Q3UTS8 97 aa11.75□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Smr3aQ61900 147 aa11.75□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Gm5153P01627 120 aa11.74□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Gm16485Q8C4B7 115 aa11.74□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 Srsf12Q8C8K3 266 aa11.74□□□□□ -0.53
Ubfd1-201ENSMUST00000033158 3110070M22RikQ9DAQ7 118 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms