RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Igkv4-68A0A0B4J1I7 117 aa6.87□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Igkv8-16A0A0G2JDG9 121 aa6.87□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Gm10337F7DEP7 55 aa6.87□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Acyp1P56376 99 aa6.87□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Trav13-2A0A075B649 110 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Ighv1-62-1A0A075B5U3 116 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Rpl18aP62717 176 aaKnown RBP6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Apoc4Q61268 124 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Mast4Q811L6 2618 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Igkv3-1A0A075B5P1 119 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Inafm2A0A1L1STD6 152 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Erdr1J3QMM0 206 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Ubr5Q80TP3 2792 aa6.86□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Spink8Q09TK9 105 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 A830031A19RikQ8BNT5 113 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Smg1Q8BKX6 3658 aaKnown RBP6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 4930432M17RikQ3V0W9 174 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Gm19935A0A1B0GSF9 52 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Gm3443F7CCV5 94 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Lyrm9Q3UN90 78 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 CdsnQ7TPC1 561 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Lelp1Q9DAE3 120 aa6.85□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Krtap27-1E9PX37 202 aa6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Dad1P61804 113 aa6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Gm8439G3UWA7 96 aa6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Cdk2ap2Q9CPY4 127 aa6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Reg3dQ9QUS9 175 aa6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 Fn1P11276 2477 aaKnown RBP6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 CrygdP04342 174 aa6.84□□□□□ -1.31
Col6a1-201ENSMUST00000001147 P01745 121 aa6.83□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Fxyd5P97808 178 aa6.83□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm10300Q8C8P7 189 aa6.83□□□□□ -1.32
Col6a1-201ENSMUST00000001147 GfyJ3KML8 504 aa6.83□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Fam19a5Q91WE9 132 aa6.83□□□□□ -1.32
Col6a1-201ENSMUST00000001147 PrcdQ00LT2 53 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Shisa2Q8QZV2 295 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Timm17bQ9Z0V7 172 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 1700011M02RikB1AX35 88 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Vpreb2P13373 142 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Ighv13-2A0A0A6YWN3 119 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Igkv3-9A0A140T8P4 119 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 3110070M22RikQ9DAQ7 118 aa6.82□□□□□ -1.32
Col6a1-201ENSMUST00000001147 P01755 137 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Igkv2-109A0A075B5K6 120 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Klk12B2RVZ0 247 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm10647E9Q8X0 124 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm10735Q3US96 136 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Notch1Q01705 2531 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm9195A0A140LHT4 2805 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Defb42Q8BVB5 75 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 2010109I03RikQ9CQ11 111 aa6.81□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm9747Q810H1 104 aa6.8□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm10322F7D7I4 111 aa6.8□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Igkv4-61A0A0G2JH00 117 aa6.8□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Eif4ebp1Q60876 117 aa6.8□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Cdc42se2Q8BGH7 84 aa6.8□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Tm2d2Q8R0I4 213 aa6.8□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Bri3P28662 125 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 5730596B20RikQ8BQ08 205 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Ormdl1Q921I0 153 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Ighv1-61P01749 117 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Ankrd17Q99NH0 2603 aaKnown RBP6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 FlnaQ8BTM8 2647 aaKnown RBP6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm17472A0A075B683 117 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm10518F6UQQ9 182 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 P06329 120 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Znf580Q9DB38 172 aa6.79□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Ly6c2P0CW03 131 aa6.78□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Cmc4Q61908 68 aa6.78□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Ighv8-11A0A075B5X4 119 aa6.78□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Gm9922Q8C3P1 144 aa6.78□□□□□ -1.32
Col6a1-201ENSMUST00000001147 Sfta2E9PXB6 77 aa6.77□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Gm9887F6RFI0 207 aa6.77□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Defb2P82020 71 aa6.77□□□□□ -1.33
Col6a1-201ENSMUST00000001147 4930535I16RikQ9CUI2 172 aa6.77□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Rps28P62858 69 aaKnown RBP6.76□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Pla2g1bQ9Z0Y2 146 aa6.76□□□□□ -1.33
Col6a1-201ENSMUST00000001147 SbsponQ3UPR9 264 aa6.76□□□□□ -1.33
Col6a1-201ENSMUST00000001147 EnhoQ8K1D8 76 aa6.76□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Cd164l2Q9D6W7 172 aa6.76□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igkv4-72A0A0B4J1I4 117 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igkv8-34A0A0G2JDU0 121 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Ly6gP35461 111 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Ppp1r32Q148A4 427 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 TeppQ6IMH0 216 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Rpl39lQ9CQD0 51 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Higd2aQ9CQJ1 106 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Krtap26-1Q9D7N2 215 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Trav9n-4A0A075B631 113 aa6.75□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igkv3-2A0A075B5P0 119 aa6.74□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Ndufc1Q9CQY9 76 aa6.74□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Plac8l1Q08EJ0 177 aa6.74□□□□□ -1.33
Col6a1-201ENSMUST00000001147 AI854703Q8BIN3 203 aa6.74□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Srsf12Q8C8K3 266 aa6.74□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Sostdc1Q9CQN4 206 aa6.73□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Wfdc12Q9JHY3 85 aa6.73□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Chd6A3KFM7 2711 aa6.73□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Igkv4-54A0A0G2JES9 117 aa6.73□□□□□ -1.33
Col6a1-201ENSMUST00000001147 Gm10577Q3UDV9 132 aa6.73□□□□□ -1.33
Col6a1-201ENSMUST00000001147 4930518I15RikQ3V2W7 57 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 252.9 ms