RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Psmb8P28063 276 aa7□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Gphb5Q812B2 130 aa7□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Gcn1E9PVA8 2671 aaKnown RBP7□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Pglyrp1O88593 182 aa7□□□□□ -1.29
Ldlr-202ENSMUST00000213114 SbsponQ3UPR9 264 aa7□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Lst1O08843 95 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Atp5g3P56384 141 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Atp5g1Q9CR84 136 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Ighv1-66A0A075B5X5 117 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Klk11Q9QYN3 276 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 PrlhG3UWC3 86 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Sh2d1aO88890 126 aa6.99□□□□□ -1.29
Ldlr-202ENSMUST00000213114 FasnP19096 2504 aaKnown RBP6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Polr2kQ63871 58 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 CnfnQ6PCW6 111 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Higd2aQ9CQJ1 106 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 FryE9Q8I9 3020 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Igf1P05017 153 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Prr9Q8BV84 116 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Tmem258P61166 79 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Dph3Q8K0W9 82 aa6.98□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Trav13-4-dv7A0A075B6C2 110 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Trav11A0A0B4J1J9 114 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 A0A286YE02 88 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Ly6c2P0CW03 131 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Gm9747Q810H1 104 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Q9D8Q6 235 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Trav14d-3-dv8A0A075B619 120 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Trav13d-4A0A0G2JFX3 110 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 P01745 121 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Rpl32P62911 135 aaKnown RBP6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 PemtQ61907 199 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Ankrd17Q99NH0 2603 aaKnown RBP6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Hcfc1Q61191 2045 aaKnown RBP6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Inafm2A0A1L1STD6 152 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Wdr38Q9D994 303 aa6.97□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Gm10490F6VBM2 120 aa6.96□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Gm10251J3QPM5 127 aa6.96□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Zc2hc1bQ9D534 172 aa6.96□□□□□ -1.29
Ldlr-202ENSMUST00000213114 Igkv4-61A0A0G2JH00 117 aa6.96□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Ighv8-12A0A0G2JDE1 119 aa6.95□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Gm8439G3UWA7 96 aa6.95□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Gm9767G3X930 207 aa6.95□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Esm1Q9QYY7 184 aa6.95□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Gata1P17679 413 aa6.95□□□□□ -1.3
Ldlr-202ENSMUST00000213114 AngP21570 145 aa6.94□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Trav13-2A0A075B649 110 aa6.94□□□□□ -1.3
Ldlr-202ENSMUST00000213114 B230359F08RikA0A0B4J1K3 109 aa6.94□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Ighv1-72P01751 139 aa6.94□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Q9DAB9 146 aa6.94□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Igkv4-72A0A0B4J1I4 117 aa6.93□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Igkv4-54A0A0G2JES9 117 aa6.93□□□□□ -1.3
Ldlr-202ENSMUST00000213114 BptfA2A654 3036 aaKnown RBP6.93□□□□□ -1.3
Ldlr-202ENSMUST00000213114 9430069I07RikQ9CX21 111 aa6.93□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Trav13-1A0A075B644 110 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 A930009A15RikG3UYI6 118 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Spink8Q09TK9 105 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 SvipQ3UZP4 77 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 BikO70337 150 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Fgfbp3Q1HCM0 245 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 SrarpQ3ULG3 163 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 FlnaQ8BTM8 2647 aaKnown RBP6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Gm4861Q8C5A4 106 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 1700010B08RikQ9DAI7 102 aa6.92□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Smim1P0C8K7 78 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Tmem254aP0DN89 123 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Tmem254bP0DN90 123 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Tmem254cP0DN91 123 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 4930564D02RikQ9D4S4 103 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 VcanQ62059 3357 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Fxyd5P97808 178 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 MifP34884 115 aaKnown RBP6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Reg3bP35230 175 aa6.91□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Ighv2-6-8A0A0A6YWY9 116 aa6.9□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Igkv4-69A0A0B4J1I6 116 aa6.9□□□□□ -1.3
Ldlr-202ENSMUST00000213114 P01729 129 aa6.9□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Tm2d2Q8R0I4 213 aa6.9□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Ighv8-5A0A0A6YY60 119 aa6.9□□□□□ -1.3
Ldlr-202ENSMUST00000213114 Trav4-3A0A0B4J1K1 110 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Trav13n-2A0A0G2JF93 110 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Gm21748Q3UE70 102 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Crip3Q6Q6R3 243 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Ighv1-63A0A075B5X2 117 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv1-35A0A0G2JDE5 120 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Gm10518F6UQQ9 182 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Acyp1P56376 99 aa6.9□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Usp24B1AY13 2617 aaKnown RBP6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 B230217C12RikE9Q3Z1 139 aa6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Igkv4-79A0A075B5L8 119 aa6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Smrp1Q2MH31 260 aa6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Naa38Q9D2U5 125 aa6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Wdfy4E9Q2M9 3149 aa6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Celsr1O35161 3034 aa6.89□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Dmxl2Q8BPN8 3032 aa6.88□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Gm3443F7CCV5 94 aa6.88□□□□□ -1.31
Ldlr-202ENSMUST00000213114 P01823 113 aa6.88□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Vpreb1P13372 142 aa6.88□□□□□ -1.31
Ldlr-202ENSMUST00000213114 BC048502Q80Y74 154 aa6.88□□□□□ -1.31
Ldlr-202ENSMUST00000213114 FshbQ60687 130 aa6.87□□□□□ -1.31
Ldlr-202ENSMUST00000213114 Gm10509O88255 85 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms