RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

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Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Trav7-6A0A075B640 112 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Brd3osA0A1B0GRB6 84 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gm10604Q3V0X7 143 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Polr2kQ63871 58 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 HampQ9EQ21 83 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Muc4Q8JZM8 3443 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 CubnQ9JLB4 3623 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Rpl39P62892 51 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Igkv6-13A0A0G2JGY3 119 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 PrlhG3UWC3 86 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 BsnO88737 3942 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Smrp1Q2MH31 260 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Dand5Q76LW6 185 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Brwd1Q921C3 2304 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Atp6v0e2Q91XE7 81 aa6.98□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Igkv4-91A0A075B5L2 119 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gm37389A0A0A6YW05 95 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gm28374F6SG70 93 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Ighv1-85A0A075B5Y6 117 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 BikO70337 150 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gm9922Q8C3P1 144 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Cd164l2Q9D6W7 172 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Col7a1Q63870 2944 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Arhgap32Q811P8 2089 aa6.97□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Krtap27-1E9PX37 202 aa6.96□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Rpl32-psP17932 135 aa6.96□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Nop10Q9CQS2 64 aa6.96□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 MplkipQ9D011 178 aa6.96□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 BC048562Q80ZQ7 204 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Notch2O35516 2470 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Igkv4-68A0A0B4J1I7 117 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Gm3250E9Q1M3 230 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Rpl36aP83882 106 aaKnown RBP6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Igkv2-137A0A0B4J1H6 120 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 B230217C12RikE9Q3Z1 139 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Defb42Q8BVB5 75 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Gm14137Q8CE97 175 aa6.96□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 OdaphJ3QNT8 126 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Sox16Q62247 57 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Ifitm1Q9D103 106 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 A530064D06RikQ8BNV8 229 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Mrpl35Q9CQL6 188 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Q9D8Q6 235 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 GfyJ3KML8 504 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Fxyd5P97808 178 aa6.95□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Gm10509O88255 85 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 P18527 97 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Fgf6P21658 208 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 MifP34884 115 aaKnown RBP6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Gm10300Q8C8P7 189 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 CtrlQ9ER05 264 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Rnf114Q9ET26 229 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 AngP21570 145 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Dmrt3Q80WT2 476 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 AI854703Q8BIN3 203 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Timm17aQ9Z0V8 171 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Ighv1-61P01749 117 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Cmc4Q61908 68 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Klk5Q9D140 293 aa6.94□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Fgfbp3Q1HCM0 245 aa6.93□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Usp9yF8VPU6 2556 aa6.93□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Celsr2Q9R0M0 2920 aa6.93□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Krtap24-1G3X9A2 248 aa6.93□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 P84751 237 aa6.93□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Apoc4Q61268 124 aa6.93□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Ndufa1O35683 70 aa6.92□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Timm17bQ9Z0V7 172 aa6.92□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Cdip1Q9DB75 208 aa6.92□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Spink1P09036 80 aa6.92□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 FcorP0DJI6 106 aa6.92□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Fam19a4Q7TPG5 135 aa6.92□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 A0A286YE02 88 aa6.91□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Gm9513B3GLJ6 99 aa6.91□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 Il1f10Q8R459 152 aa6.91□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 P01837 106 aa6.9□□□□□ -1.3
Sh3rf1-202ENSMUST00000209611 P06329 120 aa6.9□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Igkv4-53A0A0G2JFC6 119 aa6.9□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm7257D3YX25 99 aa6.9□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Atp5g3P56384 141 aa6.9□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Defb12Q8K4N3 78 aa6.9□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 LrbaQ9ESE1 2856 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Trav4d-3A0A075B625 110 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Crip2Q9DCT8 208 aaKnown RBP6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Esm1Q9QYY7 184 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Xirp2Q4U4S6 3784 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 NpwA0A1L1STR8 176 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Vpreb2P13373 142 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 E130218I03RikA0A0U1RNU5 63 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 9430015G10RikA2ASP7 199 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Foxi2Q3I5G5 311 aa6.89□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Ighv1-49A0A0A6YWX2 117 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Trav9d-3A0A075B695 113 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 CdsnQ7TPC1 561 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Chchd7Q8K2Q5 85 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Leap2Q91V13 76 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 BC025920Q3US60 128 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 4930432M17RikQ3V0W9 174 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 H2al1aQ5M8Q2 105 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 H2al1eQ810S6 105 aa6.88□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Chd6A3KFM7 2711 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms