RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Igkv4-68A0A0B4J1I7 117 aa9.11□□□□□ -0.95
Ebf3-203ENSMUST00000168203 P01738 130 aa9.11□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Cd99Q8VCN6 175 aa9.11□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Ifitm1Q9D103 106 aa9.11□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Adgrg4B7ZCC9 3073 aa9.11□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Tmem86bQ497J1 226 aa9.1□□□□□ -0.95
Ebf3-203ENSMUST00000168203 TeppQ6IMH0 216 aa9.1□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Ubl5Q9EPV8 73 aa9.1□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Abca12E9Q876 2595 aa9.1□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Ighv2-7A0A075B5Q8 116 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Ighv12-3A0A075B5T1 117 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 1810032O08RikE9PZV8 113 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Lamtor3O88653 124 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Psmb8P28063 276 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Trbv16A0A0B4J1H3 115 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 P01823 113 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Pet100P0DJE0 76 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 CenpwQ3URR0 86 aa9.09□□□□□ -0.95
Ebf3-203ENSMUST00000168203 Csdc2Q91YQ3 154 aa9.08□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Lage3Q9CR70 148 aa9.08□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Ighv1-52A0A0A6YXC3 117 aa9.08□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Gphb5Q812B2 130 aa9.08□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Gcn1E9PVA8 2671 aaKnown RBP9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Trav13-2A0A075B649 110 aa9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Klk12B2RVZ0 247 aa9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 PlaurP35456 327 aa9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Ighv1-66A0A075B5X5 117 aa9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Ighv1-75A0A075B5Y2 117 aa9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Ighv1-85A0A075B5Y6 117 aa9.07□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Rpl35aO55142 110 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Odf1Q61999 247 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Mrpl52Q9D0Y8 121 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Trav13d-4A0A0G2JFX3 110 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Gm10226O88253 85 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 1700010B08RikQ9DAI7 102 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Nbeal1E9PYP2 2688 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Gm11565A2A4M7 156 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Gm21994F6T2D2 329 aa9.06□□□□□ -0.96
Ebf3-203ENSMUST00000168203 NbeaQ9EPN1 2936 aa9.05□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Pglyrp1O88593 182 aa9.05□□□□□ -0.96
Ebf3-203ENSMUST00000168203 4930518I15RikQ3V2W7 57 aa9.05□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Defb12Q8K4N3 78 aa9.05□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Crlf1Q9JM58 425 aa9.05□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Gm17472A0A075B683 117 aa9.04□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Dad1P61804 113 aa9.04□□□□□ -0.96
Ebf3-203ENSMUST00000168203 P01786 117 aa9.04□□□□□ -0.96
Ebf3-203ENSMUST00000168203 EnhoQ8K1D8 76 aa9.04□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Ighv1-11A0A0A6YWI9 117 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Tmem254aP0DN89 123 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Tmem254bP0DN90 123 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Tmem254cP0DN91 123 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Mapk1ip1lQ8BH93 242 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Q9DAB9 146 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Smr3aQ61900 147 aa9.03□□□□□ -0.96
Ebf3-203ENSMUST00000168203 Cox7a1P56392 80 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Rpl18aP62717 176 aaKnown RBP9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 AI854703Q8BIN3 203 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Gm10300Q8C8P7 189 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Igkv8-16A0A0G2JDG9 121 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Gm26661M0QWV4 156 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Gm10647E9Q8X0 124 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Znf580Q9DB38 172 aa9.02□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Psmb11Q8BG41 302 aa9.01□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Nop10Q9CQS2 64 aa9.01□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ighv3-3A0A0A6YWL2 116 aa9.01□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Vpreb1P13372 142 aa9.01□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ubr5Q80TP3 2792 aa9.01□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Serp2Q6TAW2 65 aa9.01□□□□□ -0.97
Ebf3-203ENSMUST00000168203 PtprqP0C5E4 2300 aa9□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Eif4ebp1Q60876 117 aa9□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Gm7075D3Z497 112 aa9□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Igkv4-61A0A0G2JH00 117 aa9□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Igkv1-99F6XWB2 120 aa9□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Csmd1Q923L3 3564 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Lama5Q61001 3718 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 P01729 129 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Esm1Q9QYY7 184 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Smg1Q8BKX6 3658 aaKnown RBP8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ighv2-3A0A075B696 115 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 1700011M02RikB1AX35 88 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ccl21aP84444 133 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ccl21bP86792 133 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ccl21cP86793 133 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 SbsponQ3UPR9 264 aa8.99□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ighv1-62-1A0A075B5U3 116 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Trav4-3A0A0B4J1K1 110 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Reg3dQ9QUS9 175 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Gm9913Q8BQQ2 135 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Fam19a5Q91WE9 132 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Gm10490F6VBM2 120 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Rpl39lQ9CQD0 51 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Spata25Q9DA57 226 aa8.98□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Eif4ebp3Q80VV3 101 aa8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 SnurfQ9WU12 71 aa8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 4930470P17RikQ9D542 155 aa8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Lelp1Q9DAE3 120 aa8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Zfp462B1AWL2 2495 aaKnown RBP8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Ighv2-6-8A0A0A6YWY9 116 aa8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Igkv4-69A0A0B4J1I6 116 aa8.97□□□□□ -0.97
Ebf3-203ENSMUST00000168203 Igkv4-78A0A0A6YYE5 119 aa8.96□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 121.8 ms