RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 NischQ80TM9 1593 aa22.9■■□□□ 1.26
Ebf3-203ENSMUST00000168203 Gm35339A0A140LHH9 1649 aa22.29■■□□□ 1.16
Ebf3-203ENSMUST00000168203 Abcc9P70170 1546 aa22.16■■□□□ 1.14
Ebf3-203ENSMUST00000168203 Abcc8B2RUS7 1588 aa21.69■■□□□ 1.06
Ebf3-203ENSMUST00000168203 Rhox8Q6VSS7 320 aa21.59■■□□□ 1.05
Ebf3-203ENSMUST00000168203 Rtl1Q7M732 1744 aa20.8■□□□□ 0.92
Ebf3-203ENSMUST00000168203 Ehmt2Q9Z148 1263 aaKnown RBP20.69■□□□□ 0.9
Ebf3-203ENSMUST00000168203 Rpgrip1Q9EPQ2 1331 aa20.59■□□□□ 0.89
Ebf3-203ENSMUST00000168203 Ccdc180J3QNE4 1664 aa20.46■□□□□ 0.87
Ebf3-203ENSMUST00000168203 Dcaf1Q80TR8 1506 aa20.25■□□□□ 0.83
Ebf3-203ENSMUST00000168203 ScribQ80U72 1612 aa20.13■□□□□ 0.81
Ebf3-203ENSMUST00000168203 Rb1cc1Q9ESK9 1588 aa20.06■□□□□ 0.8
Ebf3-203ENSMUST00000168203 Zcchc6Q5BLK4 1491 aaKnown RBP19.93■□□□□ 0.78
Ebf3-203ENSMUST00000168203 Ccdc136Q3TVA9 1136 aa19.91■□□□□ 0.78
Ebf3-203ENSMUST00000168203 Kdm5dQ62240 1548 aa19.89■□□□□ 0.77
Ebf3-203ENSMUST00000168203 NacadQ5SWP3 1504 aa19.84■□□□□ 0.77
Ebf3-203ENSMUST00000168203 Baz1aO88379 1555 aa19.83■□□□□ 0.76
Ebf3-203ENSMUST00000168203 Acin1Q9JIX8 1338 aaKnown RBP19.81■□□□□ 0.76
Ebf3-203ENSMUST00000168203 Pcgf6Q99NA9 353 aa19.75■□□□□ 0.75
Ebf3-203ENSMUST00000168203 HrcG5E8J6 738 aa19.65■□□□□ 0.74
Ebf3-203ENSMUST00000168203 Trim41Q5NCC3 630 aa19.57■□□□□ 0.72
Ebf3-203ENSMUST00000168203 Zeb1Q64318 1117 aa19.54■□□□□ 0.72
Ebf3-203ENSMUST00000168203 Las1lA2BE28 776 aaKnown RBP19.48■□□□□ 0.71
Ebf3-203ENSMUST00000168203 Crybg2B7ZCC2 1516 aa19.46■□□□□ 0.71
Ebf3-203ENSMUST00000168203 Sycp2Q9CUU3 1500 aa19.34■□□□□ 0.69
Ebf3-203ENSMUST00000168203 Supt5hO55201 1082 aaKnown RBP19.3■□□□□ 0.68
Ebf3-203ENSMUST00000168203 Smarca2Q6DIC0 1577 aa19.3■□□□□ 0.68
Ebf3-203ENSMUST00000168203 Cngb1E1AZ71 1325 aa19.14■□□□□ 0.65
Ebf3-203ENSMUST00000168203 Wdr66E9Q743 1299 aa19.13■□□□□ 0.65
Ebf3-203ENSMUST00000168203 Brd4Q9ESU6 1400 aaKnown RBP19.09■□□□□ 0.65
Ebf3-203ENSMUST00000168203 Neurod1Q60867 357 aa19.03■□□□□ 0.64
Ebf3-203ENSMUST00000168203 Cep164Q5DU05 1446 aa19.02■□□□□ 0.64
Ebf3-203ENSMUST00000168203 Esf1Q3V1V3 845 aaKnown RBP18.97■□□□□ 0.63
Ebf3-203ENSMUST00000168203 Gab3Q8BSM5 595 aa18.91■□□□□ 0.62
Ebf3-203ENSMUST00000168203 Cecr2E9Q2Z1 1453 aa18.89■□□□□ 0.61
Ebf3-203ENSMUST00000168203 Golga3P55937 1487 aa18.8■□□□□ 0.6
Ebf3-203ENSMUST00000168203 Ppargc1bQ8VHJ7 1014 aa18.79■□□□□ 0.6
Ebf3-203ENSMUST00000168203 BicraF8VPZ9 1578 aa18.78■□□□□ 0.6
Ebf3-203ENSMUST00000168203 CenpbP27790 599 aa18.78■□□□□ 0.6
Ebf3-203ENSMUST00000168203 Chic1Q8CBW7 227 aa18.77■□□□□ 0.6
Ebf3-203ENSMUST00000168203 Rsf1E9PWW9 1441 aaKnown RBP18.73■□□□□ 0.59
Ebf3-203ENSMUST00000168203 Synj1Q8CHC4 1574 aa18.72■□□□□ 0.59
Ebf3-203ENSMUST00000168203 CftrP26361 1476 aa18.68■□□□□ 0.58
Ebf3-203ENSMUST00000168203 Gm38655A0A286YDK6 273 aa18.63■□□□□ 0.57
Ebf3-203ENSMUST00000168203 Csrnp3P59055 597 aa18.63■□□□□ 0.57
Ebf3-203ENSMUST00000168203 Ccdc88bQ4QRL3 1481 aa18.6■□□□□ 0.57
Ebf3-203ENSMUST00000168203 NefmP08553 848 aa18.56■□□□□ 0.56
Ebf3-203ENSMUST00000168203 Cttnbp2B9EJA2 1648 aa18.54■□□□□ 0.56
Ebf3-203ENSMUST00000168203 Smarca4Q3TKT4 1613 aaKnown RBP18.53■□□□□ 0.56
Ebf3-203ENSMUST00000168203 Cdk11bP24788 784 aaKnown RBP18.53■□□□□ 0.56
Ebf3-203ENSMUST00000168203 1700123L14RikQ3V2K7 440 aa18.49■□□□□ 0.55
Ebf3-203ENSMUST00000168203 Sall2Q9QX96 1004 aa18.47■□□□□ 0.55
Ebf3-203ENSMUST00000168203 Nop58Q6DFW4 536 aaKnown RBP18.44■□□□□ 0.54
Ebf3-203ENSMUST00000168203 UbtfP25976 765 aaKnown RBP18.43■□□□□ 0.54
Ebf3-203ENSMUST00000168203 DiexfQ8BTT6 772 aaKnown RBP18.41■□□□□ 0.54
Ebf3-203ENSMUST00000168203 Top2bQ64511 1612 aa18.37■□□□□ 0.53
Ebf3-203ENSMUST00000168203 Myt1Q8CFC2 1127 aa18.36■□□□□ 0.53
Ebf3-203ENSMUST00000168203 Mier1Q5UAK0 511 aa18.32■□□□□ 0.52
Ebf3-203ENSMUST00000168203 Fmn1Q05860 1466 aa18.31■□□□□ 0.52
Ebf3-203ENSMUST00000168203 Npm2Q80W85 207 aa18.29■□□□□ 0.52
Ebf3-203ENSMUST00000168203 Atad2bE9Q166 1460 aaKnown RBP18.28■□□□□ 0.52
Ebf3-203ENSMUST00000168203 Anks4bQ8K3X6 423 aa18.28■□□□□ 0.52
Ebf3-203ENSMUST00000168203 Iqgap2Q3UQ44 1575 aa18.28■□□□□ 0.52
Ebf3-203ENSMUST00000168203 Pds5bQ4VA53 1446 aaKnown RBP18.27■□□□□ 0.51
Ebf3-203ENSMUST00000168203 Myt1lP97500 1187 aa18.24■□□□□ 0.51
Ebf3-203ENSMUST00000168203 Cc2d2aQ8CFW7 1633 aa18.22■□□□□ 0.51
Ebf3-203ENSMUST00000168203 Ttbk1Q6PCN3 1308 aa18.16■□□□□ 0.5
Ebf3-203ENSMUST00000168203 Rapgef2Q8CHG7 1496 aa18.11■□□□□ 0.49
Ebf3-203ENSMUST00000168203 Top2aQ01320 1528 aaKnown RBP18.1■□□□□ 0.49
Ebf3-203ENSMUST00000168203 Aplp2Q06335 707 aa18.05■□□□□ 0.48
Ebf3-203ENSMUST00000168203 Cep162Q6ZQ06 1403 aa18.04■□□□□ 0.48
Ebf3-203ENSMUST00000168203 Slc24a1Q91WD8 1130 aa18.03■□□□□ 0.48
Ebf3-203ENSMUST00000168203 Il27Q8K3I6 234 aa18.02■□□□□ 0.48
Ebf3-203ENSMUST00000168203 Pelp1Q9DBD5 1123 aaKnown RBP18.02■□□□□ 0.48
Ebf3-203ENSMUST00000168203 Ercc6F8VPZ5 1481 aa18■□□□□ 0.47
Ebf3-203ENSMUST00000168203 Mapk8ip2Q9ERE9 830 aa17.98■□□□□ 0.47
Ebf3-203ENSMUST00000168203 Amer1Q7TS75 1132 aa17.94■□□□□ 0.46
Ebf3-203ENSMUST00000168203 Kif15Q6P9L6 1387 aa17.93■□□□□ 0.46
Ebf3-203ENSMUST00000168203 Aebp2Q9Z248 504 aaKnown RBP17.93■□□□□ 0.46
Ebf3-203ENSMUST00000168203 Frmpd1A2AKB4 1549 aa17.91■□□□□ 0.46
Ebf3-203ENSMUST00000168203 Clip1Q922J3 1391 aa17.9■□□□□ 0.46
Ebf3-203ENSMUST00000168203 Wdr62Q3U3T8 1523 aa17.89■□□□□ 0.45
Ebf3-203ENSMUST00000168203 ClspnQ80YR7 1315 aa17.88■□□□□ 0.45
Ebf3-203ENSMUST00000168203 Bcl11aQ9QYE3 773 aa17.82■□□□□ 0.44
Ebf3-203ENSMUST00000168203 Fam71e1A1L3C1 212 aa17.82■□□□□ 0.44
Ebf3-203ENSMUST00000168203 TnnQ80Z71 1560 aa17.81■□□□□ 0.44
Ebf3-203ENSMUST00000168203 TonslQ6NZL6 1363 aa17.8■□□□□ 0.44
Ebf3-203ENSMUST00000168203 Plekhg3Q4VAC9 1341 aa17.8■□□□□ 0.44
Ebf3-203ENSMUST00000168203 Ap3b1Q9Z1T1 1105 aa17.8■□□□□ 0.44
Ebf3-203ENSMUST00000168203 Ccdc18Q640L5 1455 aa17.77■□□□□ 0.44
Ebf3-203ENSMUST00000168203 Lamc3Q9R0B6 1581 aa17.76■□□□□ 0.43
Ebf3-203ENSMUST00000168203 Tnnt3Q9QZ47 272 aa17.75■□□□□ 0.43
Ebf3-203ENSMUST00000168203 Npm1Q61937 292 aaKnown RBP17.73■□□□□ 0.43
Ebf3-203ENSMUST00000168203 SafbD3YXK2 937 aaKnown RBP17.71■□□□□ 0.43
Ebf3-203ENSMUST00000168203 Eea1Q8BL66 1411 aa17.7■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Ube2uB1AUC4 352 aa17.7■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Ubl4bQ9CQ84 188 aa17.7■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Phldb1Q6PDH0 1371 aaKnown RBP17.68■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Arhgap35Q91YM2 1499 aa17.68■□□□□ 0.42
Ebf3-203ENSMUST00000168203 PtprkP35822 1457 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 83.2 ms