RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Gm10542F6XDR3 90 aa4.15□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Lamtor3O88653 124 aa4.15□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 NrgnP60761 78 aa4.15□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Ubl5Q9EPV8 73 aa4.15□□□□□ -1.74
Rc3h1-201ENSMUST00000035911 Krtap27-1E9PX37 202 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Snrpd3P62320 126 aaKnown RBP4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Cystm1Q8K353 104 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Sostdc1Q9CQN4 206 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Dopey1Q8BL99 2399 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 P01753 117 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Fxyd5P97808 178 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 3110018I06RikQ9CXS0 120 aa4.15□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm10577Q3UDV9 132 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Fam19a1Q7TPG8 133 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Muc5acE9QAQ8 3455 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Abca4O35600 2310 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 1700011M02RikB1AX35 88 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 B230217C12RikE9Q3Z1 139 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Fgf23Q9EPC2 251 aa4.14□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ptprz1B9EKR1 2312 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Igkv4-53A0A0G2JFC6 119 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm10322F7D7I4 111 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Mob4Q6PEB6 225 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Rif1Q6PR54 2419 aaKnown RBP4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Zzef1Q5SSH7 2924 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Trav13n-2A0A0G2JF93 110 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm11213A0A1B0GR83 88 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm10549Q3URY4 149 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Pla2g2dQ9WVF6 144 aa4.13□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm28374F6SG70 93 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Vpreb2P13373 142 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 A530084C06RikQ3UTW2 186 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Bean1Q9EQG5 255 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 4930546C10RikE9Q4Y3 121 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ormdl1Q921I0 153 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ucn2Q99ML8 113 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm10647E9Q8X0 124 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Vmo1Q5SXG7 201 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 4930556J24RikQ9D4U7 146 aa4.12□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Igkv4-78A0A0A6YYE5 119 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm9925F6T2U3 160 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm5153P01627 120 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Spink8Q09TK9 105 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Dkk4Q8VEJ3 221 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Spink1P09036 80 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Cox17P56394 63 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Zfhx4Q9JJN2 3550 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Igkv1-117A0A140T8M0 119 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Prp2P05143 317 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Edn3P48299 214 aa4.11□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ighv1-58A0A075B5W9 117 aa4.1□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 DspE9Q557 2883 aaKnown RBP4.1□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Igkv2-109A0A075B5K6 120 aa4.1□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 BlcapP62951 87 aa4.1□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ighv1-63A0A075B5X2 117 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm10490F6VBM2 120 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ndufc1Q9CQY9 76 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Vps13cQ8BX70 3748 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Trav13-4-dv7A0A075B6C2 110 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Igkv4-62A0A0G2JDW9 117 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Ifitm6A0A1B0GS75 124 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Inafm2A0A1L1STD6 152 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Gm3285A0A1W2P7U0 201 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 CnbpP53996 178 aaKnown RBP4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Synj2bpQ9D6K5 145 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Sec16aA2AIX1 2377 aa4.09□□□□□ -1.75
Rc3h1-201ENSMUST00000035911 Igkv4-79A0A075B5L8 119 aa4.09□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 B230359F08RikA0A0B4J1K3 109 aa4.09□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Mrps21P58059 87 aa4.09□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Fgfbp3Q1HCM0 245 aa4.09□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Rpl39lQ9CQD0 51 aa4.09□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 RelnQ60841 3461 aa4.09□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Ighv1-56A0A0A6YXG2 117 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Igkv4-69A0A0B4J1I6 116 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Trbv13-2A0A140T8N6 113 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 MsmbO08540 113 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Crlf1Q9JM58 425 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Gm10553J3QPF1 123 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Gm10509O88255 85 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Gm10845Q3UNY9 185 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Usmg5Q78IK2 58 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Dynlrb2Q9DAJ5 96 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Tln1P26039 2541 aaKnown RBP4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Trav13-1A0A075B644 110 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 1810062G17RikG3X8Y2 129 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Ppp1r32Q148A4 427 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 E130116L18RikQ8BMV6 101 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Fam229bQ8CF36 80 aa4.08□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Wdfy4E9Q2M9 3149 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Trav9-2A0A075B647 113 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Trav9-4A0A0B4J1K2 113 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 1810032O08RikE9PZV8 113 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 CrygaP04345 174 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Q9DAA7 145 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Trav9n-2A0A0G2JDP3 113 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Gm15557A6PWY0 234 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Nsun4C4P6S0 806 aaKnown RBP4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Erdr1J3QMM0 206 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 Gm21887J3QQ04 176 aa4.07□□□□□ -1.76
Rc3h1-201ENSMUST00000035911 P01819 144 aa4.07□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms