RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Trav13-1A0A075B644 110 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Scgb1b2O35176 93 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Smim26Q3V460 107 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Ighv1-11A0A0A6YWI9 117 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Gm7075D3Z497 112 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Tmem213Q08EA8 116 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 BC025920Q3US60 128 aa8.3□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Gm16381A0A1Y7VKT9 73 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Smr3aQ61900 147 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Psmb11Q8BG41 302 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 4930535I16RikQ9CUI2 172 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Trav11A0A0B4J1J9 114 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Sh2d1aO88890 126 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 CenpwQ3URR0 86 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Ighv5-9-1A0A0A6YVS4 126 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Nop10Q9CQS2 64 aa8.29□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Ighv8-11A0A075B5X4 119 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Gm3618D3Z4P5 127 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Morn3Q8C5T4 241 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Gm2916Q9D9B9 127 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Ankrd11E9Q4F7 2643 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Tmem243B2RVB9 118 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 B230307C23RikQ8BLB2 64 aa8.28□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Cox7a1P56392 80 aa8.27□□□□□ -1.08
Topbp1-201ENSMUST00000035164 Crlf1Q9JM58 425 aa8.27□□□□□ -1.08
Topbp1-201ENSMUST00000035164 B230217C12RikE9Q3Z1 139 aa8.27□□□□□ -1.09
Topbp1-201ENSMUST00000035164 5730596B20RikQ8BQ08 205 aa8.27□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Igkv4-78A0A0A6YYE5 119 aa8.27□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Trav13d-4A0A0G2JFX3 110 aa8.27□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Prr9Q8BV84 116 aa8.27□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Chd6A3KFM7 2711 aa8.27□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Ighv2-6-8A0A0A6YWY9 116 aa8.26□□□□□ -1.09
Topbp1-201ENSMUST00000035164 TeppQ6IMH0 216 aa8.26□□□□□ -1.09
Topbp1-201ENSMUST00000035164 1700010B08RikQ9DAI7 102 aa8.26□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Eif4ebp3Q80VV3 101 aa8.26□□□□□ -1.09
Topbp1-201ENSMUST00000035164 P01729 129 aa8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Ighv1-62-1A0A075B5U3 116 aa8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Ighv1-5A0A0A6YWG2 117 aa8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 NipblQ6KCD5 2798 aaKnown RBP8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Trav13-2A0A075B649 110 aa8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 E130218I03RikA0A0U1RNU5 63 aa8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Il19Q8CJ70 176 aa8.25□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Igkv4-79A0A075B5L8 119 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Wfdc15aQ8BH89 80 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Shisa2Q8QZV2 295 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 FlncQ8VHX6 2726 aaKnown RBP8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Igkv2-109A0A075B5K6 120 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Gm5089A1L3C8 106 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Defb26Q30KN7 186 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 SvipQ3UZP4 77 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Apoc4Q61268 124 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Lage3Q9CR70 148 aa8.24□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Gm17472A0A075B683 117 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Gm10647E9Q8X0 124 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Muc4Q8JZM8 3443 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Gm9747Q810H1 104 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 1700011M02RikB1AX35 88 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Cox17P56394 63 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Celsr2Q9R0M0 2920 aa8.23□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Psmb8P28063 276 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Eif4ebp1Q60876 117 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 3110070M22RikQ9DAQ7 118 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Lama5Q61001 3718 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Gm9887F6RFI0 207 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Gm10226O88253 85 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Svep1A2AVA0 3567 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Igkv4-69A0A0B4J1I6 116 aa8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 MifP34884 115 aaKnown RBP8.22□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Znf580Q9DB38 172 aa8.21□□□□□ -1.09
Topbp1-201ENSMUST00000035164 Igkv4-53A0A0G2JFC6 119 aa8.21□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Klk12B2RVZ0 247 aa8.21□□□□□ -1.1
Topbp1-201ENSMUST00000035164 ColqO35348 457 aa8.21□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Fhl2O70433 279 aa8.21□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Nf1Q04690 2841 aa8.21□□□□□ -1.1
Topbp1-201ENSMUST00000035164 PrlhG3UWC3 86 aa8.2□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Ly6gP35461 111 aa8.2□□□□□ -1.1
Topbp1-201ENSMUST00000035164 AI854703Q8BIN3 203 aa8.2□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Notch1Q01705 2531 aa8.2□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Gm37988J3QM41 62 aa8.2□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Timm17bQ9Z0V7 172 aa8.2□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Trav4-3A0A0B4J1K1 110 aa8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Defa27F2Z403 93 aa8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Pla2g2aP31482 146 aa8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Igkv4-68A0A0B4J1I7 117 aa8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Gm10735Q3US96 136 aa8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Dand5Q76LW6 185 aa8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 FlnaQ8BTM8 2647 aaKnown RBP8.19□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Igkv1-99F6XWB2 120 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Esm1Q9QYY7 184 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 P01755 137 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Gm10300Q8C8P7 189 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Gm10509O88255 85 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 P01745 121 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Gm9922Q8C3P1 144 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Brk1Q91VR8 75 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Sostdc1Q9CQN4 206 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Ubr5Q80TP3 2792 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Utp20Q5XG71 2788 aaKnown RBP8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Gm26661M0QWV4 156 aa8.18□□□□□ -1.1
Topbp1-201ENSMUST00000035164 Muc2Q80Z19 2680 aa8.18□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms