RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 CckP09240 115 aa14.56□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Try10Q792Z1 246 aaKnown RBP14.56□□□□□ -0.08
Cdx1-201ENSMUST00000025521 CrygfQ9CXV3 174 aa14.56□□□□□ -0.08
Cdx1-201ENSMUST00000025521 4930546C10RikE9Q4Y3 121 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Hint1P70349 126 aaKnown RBP14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Fam240bJ3QMB3 78 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Ighv1-61P01749 117 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Gata3P23772 443 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Defa3P28310 93 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Defa10P50708 93 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Defa15P50713 93 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 A830031A19RikQ8BNT5 113 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Pla2g1bQ9Z0Y2 146 aa14.55□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Trav13d-1A0A075B606 110 aa14.54□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Spink1P09036 80 aa14.54□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Klk9Q32M27 251 aa14.54□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Rmi2Q3UPE3 149 aa14.54□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Il1f10Q8R459 152 aa14.54□□□□□ -0.08
Cdx1-201ENSMUST00000025521 9430069I07RikQ9CX21 111 aa14.54□□□□□ -0.08
Cdx1-201ENSMUST00000025521 NpwA0A1L1STR8 176 aa14.53□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Gm10542F6XDR3 90 aa14.53□□□□□ -0.08
Cdx1-201ENSMUST00000025521 CrygdP04342 174 aa14.53□□□□□ -0.08
Cdx1-201ENSMUST00000025521 CrygeQ03740 174 aa14.53□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Gm20730A0A075B5J6 119 aa14.52□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Ighv1-49A0A0A6YWX2 117 aa14.52□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Gm9513B3GLJ6 99 aa14.52□□□□□ -0.08
Cdx1-201ENSMUST00000025521 Cox7a1P56392 80 aa14.52□□□□□ -0.08
Cdx1-201ENSMUST00000025521 P01745 121 aa14.52□□□□□ -0.09
Cdx1-201ENSMUST00000025521 P01823 113 aa14.52□□□□□ -0.09
Cdx1-201ENSMUST00000025521 BC048562Q80ZQ7 204 aa14.52□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Q8R092 253 aa14.52□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Ighv1-62-1A0A075B5U3 116 aa14.51□□□□□ -0.09
Cdx1-201ENSMUST00000025521 NrepQ07475 68 aa14.51□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Rpl32-psP17932 135 aa14.5□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Psors1c2Q80ZC9 134 aa14.5□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Ppp1r32Q148A4 427 aa14.5□□□□□ -0.09
Cdx1-201ENSMUST00000025521 4930432M17RikQ3V0W9 174 aa14.5□□□□□ -0.09
Cdx1-201ENSMUST00000025521 MobpQ9D2P8 170 aa14.5□□□□□ -0.09
Cdx1-201ENSMUST00000025521 1700010B08RikQ9DAI7 102 aa14.5□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Igkv4-61A0A0G2JH00 117 aa14.49□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Fbn1Q61554 2873 aaKnown RBP14.49□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Rpl13aP19253 203 aaKnown RBP14.48□□□□□ -0.09
Cdx1-201ENSMUST00000025521 CirbpP60824 172 aaKnown RBP14.48□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Rab37Q9JKM7 223 aa14.48□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Tcf24V9GWT9 166 aa14.48□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Gm3233E9Q2H5 230 aa14.47□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Ociad2Q9D8W7 154 aa14.47□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Glrp1E9Q9S8 174 aa14.46□□□□□ -0.09
Cdx1-201ENSMUST00000025521 Ighv1-59A0A0A6YXE0 117 aa14.45□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Atp6v0e2Q91XE7 81 aa14.45□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Nbeal2Q6ZQA0 2742 aa14.45□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Itpr2Q9Z329 2701 aa14.45□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Igkv4-54A0A0G2JES9 117 aa14.44□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Gm7257D3YX25 99 aa14.43□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Cops9Q3U898 57 aa14.43□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Zfp951A0A087WRH0 451 aa14.42□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Esm1Q9QYY7 184 aa14.42□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Sh2d1aO88890 126 aa14.42□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Ss18l2Q9D174 77 aa14.42□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Foxc1Q61572 553 aa14.41□□□□□ -0.1
Cdx1-201ENSMUST00000025521 Odf3l2Q3TZ65 277 aa14.39□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Znf740Q6NZQ6 180 aa14.39□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Igkv4-53A0A0G2JFC6 119 aa14.39□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Gm11444F6QMA6 170 aa14.39□□□□□ -0.11
Cdx1-201ENSMUST00000025521 4930415O20RikQ8CDT5 131 aa14.39□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Hrct1Q9D6B9 109 aa14.39□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Gm10577Q3UDV9 132 aa14.38□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Zfand2aQ9JII7 171 aa14.38□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Hspg2Q05793 3707 aaKnown RBP14.37□□□□□ -0.11
Cdx1-201ENSMUST00000025521 D730001G18RikA0A087WQU7 115 aa14.37□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Trav13n-1A0A0G2JEU8 110 aa14.37□□□□□ -0.11
Cdx1-201ENSMUST00000025521 RetnQ99P87 114 aa14.37□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Vmo1Q5SXG7 201 aa14.36□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Tm2d2Q8R0I4 213 aa14.36□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Tmem223Q9CQE2 199 aaKnown RBP14.35□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Tomm7Q9D173 55 aa14.35□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Trav11A0A0B4J1J9 114 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Sprr1bQ62267 153 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Klk11Q9QYN3 276 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Tenm1Q9WTS4 2731 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Brwd1Q921C3 2304 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Gm904Q3V2L5 102 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Leap2Q91V13 76 aa14.34□□□□□ -0.11
Cdx1-201ENSMUST00000025521 Trav13-4-dv7A0A075B6C2 110 aa14.33□□□□□ -0.12
Cdx1-201ENSMUST00000025521 PrcdQ00LT2 53 aa14.33□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Defb47Q30KN1 79 aa14.33□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Dand5Q76LW6 185 aa14.33□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Sostdc1Q9CQN4 206 aa14.33□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Tex15F8VPN2 2785 aa14.33□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Dad1P61804 113 aa14.32□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Defb50Q6TU36 73 aa14.32□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Gm10135F6TEE5 83 aa14.31□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Zc2hc1bQ9D534 172 aa14.31□□□□□ -0.12
Cdx1-201ENSMUST00000025521 1700011M02RikB1AX35 88 aa14.3□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Atp5g3P56384 141 aa14.3□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Atp5g1Q9CR84 136 aa14.3□□□□□ -0.12
Cdx1-201ENSMUST00000025521 CenpwQ3URR0 86 aa14.29□□□□□ -0.12
Cdx1-201ENSMUST00000025521 LbhQ9CX60 105 aa14.29□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Hivep3A2A884 2348 aa14.29□□□□□ -0.12
Cdx1-201ENSMUST00000025521 Trbv13-2A0A140T8N6 113 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms