RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Trav13d-1A0A075B606 110 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 NpwA0A1L1STR8 176 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 1500011B03RikQ3TTH7 73 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm4861Q8C5A4 106 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 Lelp1Q9DAE3 120 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 Pfn2Q9JJV2 140 aa8.03□□□□□ -1.12
Msh3-201ENSMUST00000022220 Fhl2O70433 279 aa8.02□□□□□ -1.12
Msh3-201ENSMUST00000022220 FcorP0DJI6 106 aa8.02□□□□□ -1.12
Msh3-201ENSMUST00000022220 Gm9767G3X930 207 aa8.02□□□□□ -1.13
Msh3-201ENSMUST00000022220 Spry2Q9QXV8 315 aa8.02□□□□□ -1.13
Msh3-201ENSMUST00000022220 Hbb-b2P02089 147 aa8.01□□□□□ -1.13
Msh3-201ENSMUST00000022220 Nbeal2Q6ZQA0 2742 aa8.01□□□□□ -1.13
Msh3-201ENSMUST00000022220 Igfn1Q3KNY0 2849 aa8.01□□□□□ -1.13
Msh3-201ENSMUST00000022220 Sh2d1aO88890 126 aa8□□□□□ -1.13
Msh3-201ENSMUST00000022220 Xcl1P47993 114 aa8□□□□□ -1.13
Msh3-201ENSMUST00000022220 Crlf1Q9JM58 425 aa8□□□□□ -1.13
Msh3-201ENSMUST00000022220 Hivep1Q03172 2688 aa8□□□□□ -1.13
Msh3-201ENSMUST00000022220 Igkv4-59A0A0B4J1I8 117 aa8□□□□□ -1.13
Msh3-201ENSMUST00000022220 Hist1h4aP62806 103 aaKnown RBP8□□□□□ -1.13
Msh3-201ENSMUST00000022220 Ly6c2P0CW03 131 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Cfap126Q6P8X9 189 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gatd1Q8BFQ8 220 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Igf1P05017 153 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Ang3P97802 145 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Mfap4Q9D1H9 257 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Psmb8P28063 276 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gm10735Q3US96 136 aa7.99□□□□□ -1.13
Msh3-201ENSMUST00000022220 Igkv6-13A0A0G2JGY3 119 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Lyrm9Q3UN90 78 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Esm1Q9QYY7 184 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Celsr2Q9R0M0 2920 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Trav14d-3-dv8A0A075B619 120 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Cops9Q3U898 57 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Igkv3-1A0A075B5P1 119 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gm8439G3UWA7 96 aa7.98□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gm3618D3Z4P5 127 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Socs3O35718 225 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gm2916Q9D9B9 127 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Cmc4Q61908 68 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Nf1Q04690 2841 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gm7102J3QQ10 178 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Apoc4Q61268 124 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Polr2kQ63871 58 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Q99M08 65 aa7.97□□□□□ -1.13
Msh3-201ENSMUST00000022220 Gm10542F6XDR3 90 aa7.96□□□□□ -1.13
Msh3-201ENSMUST00000022220 4930432M17RikQ3V0W9 174 aa7.96□□□□□ -1.13
Msh3-201ENSMUST00000022220 SpenQ62504 3644 aaKnown RBP7.96□□□□□ -1.14
Msh3-201ENSMUST00000022220 Kmt2bO08550 2713 aa7.96□□□□□ -1.14
Msh3-201ENSMUST00000022220 SelenowP63300 88 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Gm10300Q8C8P7 189 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Ighv13-2A0A0A6YWN3 119 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Trav13n-1A0A0G2JEU8 110 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Trav9d-4A0A0G2JG37 103 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Defb29Q8BGW9 78 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Trbv16A0A0B4J1H3 115 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 GfyJ3KML8 504 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Higd2aQ9CQJ1 106 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Atp5g1Q9CR84 136 aa7.95□□□□□ -1.14
Msh3-201ENSMUST00000022220 Tmem243B2RVB9 118 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 A930009A15RikG3UYI6 118 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 4930442H23RikQ9D5G7 103 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 LrbaQ9ESE1 2856 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 Igsf10Q3V1M1 2594 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 Ighv1-75A0A075B5Y2 117 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 Samd13D3YUG0 102 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 Gphb5Q812B2 130 aa7.94□□□□□ -1.14
Msh3-201ENSMUST00000022220 PrcdQ00LT2 53 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 FshbQ60687 130 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 Igkv8-34A0A0G2JDU0 121 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 Trav11A0A0B4J1J9 114 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 AngP21570 145 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 Csdc2Q91YQ3 154 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 9430069I07RikQ9CX21 111 aa7.93□□□□□ -1.14
Msh3-201ENSMUST00000022220 Tmem86bQ497J1 226 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Ifitm1Q9D103 106 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Igkv8-24A0A140T8P5 121 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Gm10490F6VBM2 120 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 CdsnQ7TPC1 561 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Ly6hQ9WUC3 139 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Lst1O08843 95 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 CenpwQ3URR0 86 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Naa38Q9D2U5 125 aa7.92□□□□□ -1.14
Msh3-201ENSMUST00000022220 Igkv4-62A0A0G2JDW9 117 aa7.91□□□□□ -1.14
Msh3-201ENSMUST00000022220 Gm3233E9Q2H5 230 aa7.91□□□□□ -1.14
Msh3-201ENSMUST00000022220 Smim26Q3V460 107 aa7.91□□□□□ -1.14
Msh3-201ENSMUST00000022220 Gm3443F7CCV5 94 aa7.91□□□□□ -1.14
Msh3-201ENSMUST00000022220 MalO09198 153 aa7.91□□□□□ -1.14
Msh3-201ENSMUST00000022220 Zfhx4Q9JJN2 3550 aa7.91□□□□□ -1.14
Msh3-201ENSMUST00000022220 B230307C23RikQ8BLB2 64 aa7.9□□□□□ -1.14
Msh3-201ENSMUST00000022220 Dmbt1Q60997 2085 aa7.9□□□□□ -1.14
Msh3-201ENSMUST00000022220 PemtQ61907 199 aa7.9□□□□□ -1.14
Msh3-201ENSMUST00000022220 Pkd1l1Q8R526 2615 aa7.9□□□□□ -1.14
Msh3-201ENSMUST00000022220 Tex15F8VPN2 2785 aa7.9□□□□□ -1.14
Msh3-201ENSMUST00000022220 Trav13-4-dv7A0A075B6C2 110 aa7.9□□□□□ -1.15
Msh3-201ENSMUST00000022220 Igkv1-35A0A0G2JDE5 120 aa7.9□□□□□ -1.15
Msh3-201ENSMUST00000022220 Trav13d-4A0A0G2JFX3 110 aa7.9□□□□□ -1.15
Msh3-201ENSMUST00000022220 Gm26661M0QWV4 156 aa7.9□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ighv1-85A0A075B5Y6 117 aa7.89□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ighv3-3A0A0A6YWL2 116 aa7.89□□□□□ -1.15
Msh3-201ENSMUST00000022220 Igkv3-2A0A075B5P0 119 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms