RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Cox17P56394 63 aa9.9□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Stab1Q8R4Y4 2571 aa9.9□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Dmrt3Q80WT2 476 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm3443F7CCV5 94 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Defa20Q45VN2 95 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Srsf12Q8C8K3 266 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Zzef1Q5SSH7 2924 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Notch1Q01705 2531 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm20730A0A075B5J6 119 aa9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Nsd1O88491 2588 aaKnown RBP9.89□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm11444F6QMA6 170 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Mtatp8P03930 67 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Sec61gP60060 68 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Snai3Q9QY31 287 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Igkv8-34A0A0G2JDU0 121 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Hint1P70349 126 aaKnown RBP9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm5464Q3UY29 175 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 March3Q8BRX9 218 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Ly6g5bQ8K1T4 194 aa9.88□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Higd2aQ9CQJ1 106 aa9.87□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Sh2d1aO88890 126 aa9.87□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Klk5Q9D140 293 aa9.87□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Akap13E9Q394 2776 aa9.86□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Lect2O88803 151 aa9.86□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm14137Q8CE97 175 aa9.86□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm45785A0A1B0GT05 94 aa9.86□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Kmt2bO08550 2713 aa9.86□□□□□ -0.83
Clcn3-204ENSMUST00000110301 PrcdQ00LT2 53 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm10300Q8C8P7 189 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Pfn2Q9JJV2 140 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm10604Q3V0X7 143 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Znf740Q6NZQ6 180 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Cfap126Q6P8X9 189 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Ighv3-3A0A0A6YWL2 116 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Defa4P28311 92 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Dpm2Q9Z324 84 aa9.85□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm10490F6VBM2 120 aa9.84□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Cox11Q6P8I6 275 aa9.84□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Csdc2Q91YQ3 154 aa9.84□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Foxi2Q3I5G5 311 aa9.84□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Cops9Q3U898 57 aa9.84□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Tac4Q99N14 128 aa9.84□□□□□ -0.83
Clcn3-204ENSMUST00000110301 Gm904Q3V2L5 102 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Tmem86bQ497J1 226 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Ifitm1Q9D103 106 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Wfdc15aQ8BH89 80 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Trav13d-1A0A075B606 110 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Mpv17l2Q8VIK2 200 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Phpt1Q9DAK9 124 aa9.83□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Igkv4-69A0A0B4J1I6 116 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Igkv3-9A0A140T8P4 119 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Gm5629P06327 117 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Atp5g3P56384 141 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Rmi2Q3UPE3 149 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Prr13Q9CQJ5 137 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Atp5g1Q9CR84 136 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Q9DAB9 146 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Cox6cQ9CPQ1 76 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Gm42674D3YUT9 64 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Pglyrp1O88593 182 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 CckP09240 115 aa9.82□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Ighv13-2A0A0A6YWN3 119 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Gm10542F6XDR3 90 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 P01745 121 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 BC048562Q80ZQ7 204 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Atp6v0e2Q91XE7 81 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Ighv1-66A0A075B5X5 117 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 P18527 97 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Defa23Q5G866 93 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 A530064D06RikQ8BNV8 229 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 CrygfQ9CXV3 174 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 4930564D02RikQ9D4S4 103 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Znf580Q9DB38 172 aa9.81□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Ighv2-6A0A075B6A7 116 aa9.8□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Igkv8-24A0A140T8P5 121 aa9.8□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Gm29423A0A087WRM1 55 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Igkv4-68A0A0B4J1I7 117 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Trav9d-4A0A0G2JG37 103 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 NpsP0C0P8 89 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Bri3P28662 125 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Cd99Q8VCN6 175 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Timm17aQ9Z0V8 171 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 FcorP0DJI6 106 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Cox8cA6H666 72 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Wfdc2Q9DAU7 174 aa9.79□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Runx1Q03347 451 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Defb42Q8BVB5 75 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Ppp1r32Q148A4 427 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Gm9922Q8C3P1 144 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Ighv1-85A0A075B5Y6 117 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Gm3618D3Z4P5 127 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 BC107364E9Q5A2 140 aa9.78□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Chd6A3KFM7 2711 aa9.77□□□□□ -0.84
Clcn3-204ENSMUST00000110301 Morn3Q8C5T4 241 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Gemin7Q9CWY4 129 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Cd164l2Q9D6W7 172 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Vps13cQ8BX70 3748 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 1700020N15RikL7MTX3 112 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Defa1P11477 93 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 BtcQ05928 177 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 99.1 ms