RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 2310009B15RikA0A0A6YWI4 143 aa11.85□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Gm21748Q3UE70 102 aa11.85□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Col4a2P08122 1707 aa11.85□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Col5a1O88207 1838 aa11.84□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Ighv3-3A0A0A6YWL2 116 aa11.84□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Igkv4-59A0A0B4J1I8 117 aa11.84□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Cox7a1P56392 80 aa11.84□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 LhbO09108 141 aa11.84□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Col27a1Q5QNQ9 1845 aa11.84□□□□□ -0.51
Sptbn4-204ENSMUST00000108364 Pglyrp1O88593 182 aa11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Trav13-4-dv7A0A075B6C2 110 aa11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Gm4861Q8C5A4 106 aa11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 AcacbE9Q4Z2 2448 aa11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Edn2P22389 175 aa11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Cox6b1P56391 86 aaKnown RBP11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Dkk4Q8VEJ3 221 aa11.83□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ighv2-3A0A075B696 115 aa11.82□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Prh1P05142 261 aa11.82□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ighv1-66A0A075B5X5 117 aa11.82□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ankhd1E9PUR0 2548 aaKnown RBP11.82□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Trav13n-2A0A0G2JF93 110 aa11.82□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Igkv4-61A0A0G2JH00 117 aa11.82□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ube2d3P61079 147 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ube2d2P62838 147 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ly6hQ9WUC3 139 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Igkv3-1A0A075B5P1 119 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Trav13d-4A0A0G2JFX3 110 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Trav14d-3-dv8A0A075B619 120 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 4930470P17RikQ9D542 155 aa11.81□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 B230359F08RikA0A0B4J1K3 109 aa11.8□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 1700056E22RikF7CNM6 234 aa11.8□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Igkv3-9A0A140T8P4 119 aa11.8□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Trav13-1A0A075B644 110 aa11.79□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Cmc4Q61908 68 aa11.79□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Fxyd5P97808 178 aa11.79□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Acyp1P56376 99 aa11.79□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Pou2af1Q64693 256 aa11.79□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Ighv2-6-8A0A0A6YWY9 116 aa11.78□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 MifP34884 115 aaKnown RBP11.78□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Sptbn4E9PX29 2561 aa11.78□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Inafm2A0A1L1STD6 152 aa11.78□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Crlf1Q9JM58 425 aa11.78□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 Notch2O35516 2470 aa11.78□□□□□ -0.52
Sptbn4-204ENSMUST00000108364 ColqO35348 457 aa11.77□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 9430069I07RikQ9CX21 111 aa11.77□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Spry2Q9QXV8 315 aa11.76□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Timm17bQ9Z0V7 172 aa11.76□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Igkv2-109A0A075B5K6 120 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Smrp1Q2MH31 260 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Trav13-2A0A075B649 110 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Gphb5Q812B2 130 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Cdip1Q9DB75 208 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Igkv4-72A0A0B4J1I4 117 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Dph3Q8K0W9 82 aa11.75□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Cyyr1Q8VIH7 165 aa11.74□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Usp34Q6ZQ93 3582 aa11.74□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Ighv1-72P01751 139 aa11.74□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Igkv4-54A0A0G2JES9 117 aa11.74□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Vpreb1P13372 142 aa11.74□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Mki67E9PVX6 3177 aaKnown RBP11.74□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 P01823 113 aa11.73□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 1520401A03RikA0A0J9YVH6 598 aa11.73□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Cfap54Q8C6S9 3106 aa11.73□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Igkv4-69A0A0B4J1I6 116 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Ighv1-61P01749 117 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Nav3Q80TN7 2359 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Dad1P61804 113 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Gm17472A0A075B683 117 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Klk12B2RVZ0 247 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 SetxA2AKX3 2646 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Gm10135F6TEE5 83 aa11.72□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Tmem254aP0DN89 123 aa11.71□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Tmem254bP0DN90 123 aa11.71□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 Tmem254cP0DN91 123 aa11.71□□□□□ -0.53
Sptbn4-204ENSMUST00000108364 GfyJ3KML8 504 aa11.71□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Sh2d1aO88890 126 aa11.71□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Lyrm9Q3UN90 78 aa11.71□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Gm10226O88253 85 aa11.7□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Crip2Q9DCT8 208 aaKnown RBP11.7□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Fgfbp3Q1HCM0 245 aa11.7□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Naa38Q9D2U5 125 aa11.7□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Eif4ebp1Q60876 117 aa11.7□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Smr3aQ61900 147 aa11.7□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Lce6aD3YV94 81 aa11.69□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Gm10518F6UQQ9 182 aa11.69□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Spink8Q09TK9 105 aa11.69□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 BC048502Q80Y74 154 aa11.69□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Gm10490F6VBM2 120 aa11.69□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Ighv1-5A0A0A6YWG2 117 aa11.69□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Ighv1-62-1A0A075B5U3 116 aa11.68□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Gm9747Q810H1 104 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 NrgnP60761 78 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Ucn2Q99ML8 113 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Rpl39lQ9CQD0 51 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Pkd1l2Q7TN88 2461 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 P01729 129 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Ormdl1Q921I0 153 aa11.67□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 BC067074F6RXI4 2391 aa11.66□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 Q9DAB9 146 aa11.66□□□□□ -0.54
Sptbn4-204ENSMUST00000108364 PlaurP35456 327 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms