RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Ighv13-2A0A0A6YWN3 119 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Trav9n-2A0A0G2JDP3 113 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Prh1P05142 261 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Trav13d-4A0A0G2JFX3 110 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Gm10518F6UQQ9 182 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Pde6gP09174 87 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Trav13-4-dv7A0A075B6C2 110 aa4.54□□□□□ -1.68
Ubr4-201ENSMUST00000097822 TeppQ6IMH0 216 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Prr15lQ8JZM2 100 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Rif1Q6PR54 2419 aaKnown RBP4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Ighv1-12A0A0A6YXJ9 117 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Klk9Q32M27 251 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Tmem223Q9CQE2 199 aaKnown RBP4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Tcte2E9PY37 120 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Ndufs5Q99LY9 106 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Igf2rQ07113 2483 aaKnown RBP4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 9430015G10RikA2ASP7 199 aa4.53□□□□□ -1.68
Ubr4-201ENSMUST00000097822 Igkv3-9A0A140T8P4 119 aa4.53□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-61P01749 117 aa4.53□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Rps28P62858 69 aaKnown RBP4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Cmc4Q61908 68 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Pgpep1lQ9CWB5 130 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Trav9-2A0A075B647 113 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Trav9-4A0A0B4J1K2 113 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm5878E9PUB3 99 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 C2cd3Q52KB6 2323 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm9958Q8C9U4 106 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Reg3gO09049 174 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 P06320 134 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm10735Q3US96 136 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ly6g6dQ9Z1Q3 135 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Trav9d-3A0A075B695 113 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 AcacbE9Q4Z2 2448 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 H2al1aQ5M8Q2 105 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 H2al1eQ810S6 105 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-53A0A075B5W3 117 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 CstadQ9D245 104 aa4.52□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Cela2aP05208 271 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Mrps21P58059 87 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-75A0A075B5Y2 117 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 4930518I15RikQ3V2W7 57 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Nup210Q9QY81 1886 aaKnown RBP4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-85A0A075B5Y6 117 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Adamts20P59511 1906 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Nop10Q9CQS2 64 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Atox1O08997 68 aaKnown RBP4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Leap2Q91V13 76 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Pappa2E9PZ87 1789 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 1700074P13RikQ9D9G7 251 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm20604F8WIA3 75 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm10553J3QPF1 123 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 CnfnQ6PCW6 111 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 B230104I21RikQ3USW4 141 aa4.51□□□□□ -1.69
Ubr4-201ENSMUST00000097822 H2al1kJ3QP08 105 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 DscamQ9ERC8 2013 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ube2d4D3YUH6 135 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm5153P01627 120 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Dopey1Q8BL99 2399 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 H2al1bA0A087WP11 105 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv2-6-8A0A0A6YWY9 116 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Sslp1Q3UN54 99 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm37389A0A0A6YW05 95 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Crlf1Q9JM58 425 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Hcfc1Q61191 2045 aaKnown RBP4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Fhl1P97447 280 aaKnown RBP4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Defb33Q30KN3 62 aa4.5□□□□□ -1.69
Ubr4-201ENSMUST00000097822 P01823 113 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ncor1Q60974 2453 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm26566Q8CAC1 153 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Igkv8-26A0A075B5N5 123 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 B430305J03RikQ8BQQ8 176 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-82A0A0G2JEU7 117 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 SbsponQ3UPR9 264 aa4.49□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Trbv13-2A0A140T8N6 113 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Polr2kQ63871 58 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Igkv1-88A0A140T8N1 120 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 P01820 115 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Tm2d2Q8R0I4 213 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-72P01751 139 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Cox6b1P56391 86 aaKnown RBP4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 UqcrqQ9CQ69 82 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Prop1P97458 223 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 E030018B13RikJ3QMS9 113 aa4.48□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Cox7a1P56392 80 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Gm10577Q3UDV9 132 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Fam19a1Q7TPG8 133 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 4930524J08RikQ9CUJ5 163 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ntn5Q3UQ22 452 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Col4a6B1AVK5 1691 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 NbasE9Q411 2356 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-62-1A0A075B5U3 116 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 P84751 237 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv3-1A0A075B5S6 116 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 1810032O08RikE9PZV8 113 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Vpreb3D3Z6J4 130 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Rtl10D3YWW5 146 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Klk11Q9QYN3 276 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Eif4ebp1Q60876 117 aa4.47□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Ighv1-5A0A0A6YWG2 117 aa4.46□□□□□ -1.69
Ubr4-201ENSMUST00000097822 Spg11Q3UHA3 2430 aa4.46□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms