RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Ube2d1P61080 147 aaKnown RBP9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Fam110dQ80X91 271 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Klk5Q9D140 293 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Trav13-4-dv7A0A075B6C2 110 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Igkv4-69A0A0B4J1I6 116 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Psmb11Q8BG41 302 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 4930564D02RikQ9D4S4 103 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Gm10490F6VBM2 120 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Acyp1P56376 99 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Atp5g1Q9CR84 136 aa9.12□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Trav13d-4A0A0G2JFX3 110 aa9.11□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Ubl5Q9EPV8 73 aa9.11□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Trav11A0A0B4J1J9 114 aa9.11□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Smr3aQ61900 147 aa9.11□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Igkv4-68A0A0B4J1I7 117 aa9.11□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 E130218I03RikA0A0U1RNU5 63 aa9.11□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 AcanQ61282 2132 aaKnown RBP9.1□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Pglyrp4Q0VB07 374 aa9.1□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Gm10322F7D7I4 111 aa9.09□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Gata1P17679 413 aa9.09□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Tmem223Q9CQE2 199 aaKnown RBP9.09□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Gm21748Q3UE70 102 aa9.09□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Gm10509O88255 85 aa9.09□□□□□ -0.95
Pdlim5-201ENSMUST00000029941 Tln1P26039 2541 aaKnown RBP9.08□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Krtap27-1E9PX37 202 aa9.08□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ube2d3P61079 147 aa9.08□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ube2d2P62838 147 aa9.08□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Igkv8-34A0A0G2JDU0 121 aa9.08□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 FshbQ60687 130 aa9.08□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Col6a4A2AX52 2309 aa9.07□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Defa4P28311 92 aa9.07□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 PrcdQ00LT2 53 aa9.07□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Spink13Q3UTS8 97 aa9.07□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 MplkipQ9D011 178 aa9.07□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 BC025920Q3US60 128 aa9.06□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ly6hQ9WUC3 139 aa9.06□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 B230359F08RikA0A0B4J1K3 109 aa9.06□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Inafm2A0A1L1STD6 152 aa9.06□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Igkv1-35A0A0G2JDE5 120 aa9.06□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ep300B2RWS6 2412 aa9.06□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 TroQ6DIC6 2087 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 P01729 129 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Gm8439G3UWA7 96 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 P01823 113 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Defa21Q8C1P2 93 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Znf580Q9DB38 172 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Gm17472A0A075B683 117 aa9.05□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 A930009A15RikG3UYI6 118 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Prh1P05142 261 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Gm9747Q810H1 104 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Igkv4-61A0A0G2JH00 117 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Sh2d1aO88890 126 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Zc2hc1bQ9D534 172 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Igkv4-78A0A0A6YYE5 119 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ighv1-72P01751 139 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ppp1r32Q148A4 427 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Wdr38Q9D994 303 aa9.04□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 B230217C12RikE9Q3Z1 139 aa9.03□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Trav13-1A0A075B644 110 aa9.03□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Tm2d2Q8R0I4 213 aa9.03□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Cyyr1Q8VIH7 165 aa9.03□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 ColqO35348 457 aa9.03□□□□□ -0.96
Pdlim5-201ENSMUST00000029941 Ighv1-62-1A0A075B5U3 116 aa9.02□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Trav13n-2A0A0G2JF93 110 aa9.02□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Lama3Q61789 3330 aa9.02□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Gm4861Q8C5A4 106 aa9.02□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Ncor2Q9WU42 2472 aaKnown RBP9.02□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 HttP42859 3119 aa9.01□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Gm10518F6UQQ9 182 aa9.01□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Gm20726G3UX18 150 aa9.01□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Defb45Q3V490 66 aa9.01□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 B230307C23RikQ8BLB2 64 aa9□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Chchd7Q8K2Q5 85 aa9□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Piezo1E2JF22 2547 aa9□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Trav13-2A0A075B649 110 aa9□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 PrlhG3UWC3 86 aa9□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Tmem243B2RVB9 118 aa9□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Tnrc18Q80WC3 2878 aa8.99□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Igkv3-2A0A075B5P0 119 aa8.99□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Ighv13-2A0A0A6YWN3 119 aa8.99□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Smim20D3Z7Q2 69 aa8.99□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Igkv4-79A0A075B5L8 119 aa8.99□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Trav9n-4A0A075B631 113 aa8.99□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Samd13D3YUG0 102 aa8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Gm10577Q3UDV9 132 aa8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Sorl1O88307 2215 aaKnown RBP8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 SetxA2AKX3 2646 aa8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Gm28539A0A087WSL9 92 aa8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Gm10251J3QPM5 127 aa8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Defb42Q8BVB5 75 aa8.98□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Ly6gP35461 111 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Rpl39lQ9CQD0 51 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Trav14d-3-dv8A0A075B619 120 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Igf1P05017 153 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 MifP34884 115 aaKnown RBP8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Igkv4-72A0A0B4J1I4 117 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Igkv4-54A0A0G2JES9 117 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Bri3P28662 125 aa8.97□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Igkv2-109A0A075B5K6 120 aa8.96□□□□□ -0.97
Pdlim5-201ENSMUST00000029941 Defa28D3Z1V9 94 aa8.96□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms