RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 5730596B20RikQ8BQ08 205 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Crlf1Q9JM58 425 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ighv1-11A0A0A6YWI9 117 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ighv12-3A0A075B5T1 117 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 Ebi3O35228 228 aa12.65□□□□□ -0.38
Col17a1-201ENSMUST00000026045 B230359F08RikA0A0B4J1K3 109 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ccl21aP84444 133 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ccl21bP86792 133 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ccl21cP86793 133 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Apoc4Q61268 124 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Zc2hc1bQ9D534 172 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 TroQ6DIC6 2087 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ighv1-61P01749 117 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Cyyr1Q8VIH7 165 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Gm4861Q8C5A4 106 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 BaalcQ8VHV1 145 aa12.64□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Vpreb3D3Z6J4 130 aa12.63□□□□□ -0.39
Col17a1-201ENSMUST00000026045 P01643 108 aa12.63□□□□□ -0.39
Col17a1-201ENSMUST00000026045 FcorP0DJI6 106 aa12.63□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Wfdc15bQ9JHY4 80 aa12.63□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Atox1O08997 68 aaKnown RBP12.62□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Trav9d-3A0A075B695 113 aa12.62□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Trav13d-4A0A0G2JFX3 110 aa12.62□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ube2d4D3YUH6 135 aa12.62□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Gm9958Q8C9U4 106 aa12.62□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Trav9n-2A0A0G2JDP3 113 aa12.61□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Hoxb4P10284 250 aa12.61□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Dido1Q8C9B9 2256 aaKnown RBP12.61□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Trav13-4-dv7A0A075B6C2 110 aa12.6□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Tmem223Q9CQE2 199 aaKnown RBP12.6□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ighv13-2A0A0A6YWN3 119 aa12.59□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Pcsk5Q04592 1877 aa12.59□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Ighv1-12A0A0A6YXJ9 117 aa12.59□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Trav9-2A0A075B647 113 aa12.59□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Trav9-4A0A0B4J1K2 113 aa12.59□□□□□ -0.39
Col17a1-201ENSMUST00000026045 SnurfQ9WU12 71 aa12.59□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Adamts20P59511 1906 aa12.58□□□□□ -0.39
Col17a1-201ENSMUST00000026045 Znf239P24399 201 aa12.58□□□□□ -0.4
Col17a1-201ENSMUST00000026045 P06320 134 aa12.58□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Pla2g2aP31482 146 aa12.58□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Gm6899Q3USS0 134 aa12.58□□□□□ -0.4
Col17a1-201ENSMUST00000026045 9430015G10RikA2ASP7 199 aa12.57□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Gm15557A6PWY0 234 aa12.57□□□□□ -0.4
Col17a1-201ENSMUST00000026045 P06328 117 aa12.57□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Pcnx2Q5DU28 2122 aa12.57□□□□□ -0.4
Col17a1-201ENSMUST00000026045 SrarpQ3ULG3 163 aa12.57□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Prr13Q9CQJ5 137 aa12.56□□□□□ -0.4
Col17a1-201ENSMUST00000026045 AW146154Q3TPQ7 468 aa12.56□□□□□ -0.4
Col17a1-201ENSMUST00000026045 NrgnP60761 78 aa12.56□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Rps28P62858 69 aaKnown RBP12.56□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Prh1P05142 261 aa12.56□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Ndufb1P0DN34 57 aa12.56□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Ighv3-1A0A075B5S6 116 aa12.55□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Nop10Q9CQS2 64 aa12.55□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Gm37389A0A0A6YW05 95 aa12.55□□□□□ -0.4
Col17a1-201ENSMUST00000026045 DysfQ9ESD7 2090 aa12.55□□□□□ -0.4
Col17a1-201ENSMUST00000026045 P01748 117 aa12.54□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Smr3aQ61900 147 aa12.54□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Erdr1J3QMM0 206 aa12.53□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Piezo2Q8CD54 2822 aa12.53□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Gm10135F6TEE5 83 aa12.53□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Zfand3Q497H0 227 aa12.53□□□□□ -0.4
Col17a1-201ENSMUST00000026045 4930470P17RikQ9D542 155 aa12.53□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Dkk4Q8VEJ3 221 aa12.53□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Gm5878E9PUB3 99 aa12.52□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Ube2bP63147 152 aa12.52□□□□□ -0.4
Col17a1-201ENSMUST00000026045 Arhgef17Q80U35 2057 aa12.52□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Igkv1-88A0A140T8N1 120 aa12.52□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Gm12353A2AGJ4 60 aa12.52□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Tcte2E9PY37 120 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Fam110dQ80X91 271 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Wisp2Q9Z0G4 251 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Igkv8-26A0A075B5N5 123 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Ighv1-53A0A075B5W3 117 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Cox7a1P56392 80 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Ube2aQ9Z255 152 aa12.51□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Dopey1Q8BL99 2399 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Defb18Q30KP5 85 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 CdsnQ7TPC1 561 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Nav2E9Q842 2432 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Ighv1-75A0A075B5Y2 117 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 UqcrqQ9CQ69 82 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Ighv1-85A0A075B5Y6 117 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Gm21748Q3UE70 102 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Tanc2A2A690 1994 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Tfpi2O35536 230 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Q99M08 65 aa12.5□□□□□ -0.41
Col17a1-201ENSMUST00000026045 P01747 120 aa12.49□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Spg11Q3UHA3 2430 aa12.49□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Col4a4Q9QZR9 1682 aa12.49□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Eml6Q5SQM0 1958 aa12.49□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Gm12689Q8BQU9 117 aa12.49□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Gm16223Q8CBM3 117 aa12.49□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Ighv2-6-8A0A0A6YWY9 116 aa12.48□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Gm9913Q8BQQ2 135 aa12.48□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Zfyve26Q5DU37 2529 aa12.48□□□□□ -0.41
Col17a1-201ENSMUST00000026045 H2al1mQ9DAD9 105 aa12.48□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Cd164Q9R0L9 197 aa12.48□□□□□ -0.41
Col17a1-201ENSMUST00000026045 Lce6aD3YV94 81 aa12.48□□□□□ -0.41
Col17a1-201ENSMUST00000026045 9530003J23RikQ8BM26 151 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 72.1 ms