RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Gm5878E9PUB3 99 aa10.64□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Ndufa4l2Q4FZG9 87 aa10.64□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Wisp2Q9Z0G4 251 aa10.64□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gm17521F6QAC8 156 aa10.64□□□□□ -0.71
Col1a1-201ENSMUST00000001547 P06328 117 aa10.64□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Pde6gP09174 87 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Odf3Q920N1 254 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Klk5Q9D140 293 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gm14137Q8CE97 175 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Prr15lQ8JZM2 100 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Trav9n-4A0A075B631 113 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Tfpi2O35536 230 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Defb13Q8R2I4 64 aa10.63□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Cspg4Q8VHY0 2327 aa10.62□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Pla2g2cP48076 150 aa10.62□□□□□ -0.71
Col1a1-201ENSMUST00000001547 P01659 112 aa10.62□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gphb5Q812B2 130 aa10.62□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Q9D131 166 aa10.62□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gm17359A0A0G2JEB7 487 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 P01747 120 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 P84751 237 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Tcte2E9PY37 120 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 AW146154Q3TPQ7 468 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gm10401E9Q3K6 71 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Vpreb1P13372 142 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Col4a4Q9QZR9 1682 aa10.61□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Higd2aQ9CQJ1 106 aa10.6□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Sox16Q62247 57 aa10.6□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Esm1Q9QYY7 184 aa10.6□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Ndufc1Q9CQY9 76 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Arhgef17Q80U35 2057 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Abca4O35600 2310 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Snai3Q9QY31 287 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Ighv1-75A0A075B5Y2 117 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gm6899Q3USS0 134 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Ighv1-82A0A0G2JEU7 117 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Igkv1-117A0A140T8M0 119 aa10.59□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Igkv8-21A0A140T8P7 120 aa10.58□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Tet2Q4JK59 1912 aaKnown RBP10.58□□□□□ -0.72
Col1a1-201ENSMUST00000001547 P0C913 63 aa10.57□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Gm28539A0A087WSL9 92 aa10.57□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Tmem213Q08EA8 116 aa10.57□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Igkv1-110A0A0B4J1I0 119 aa10.57□□□□□ -0.72
Col1a1-201ENSMUST00000001547 H2al1mQ9DAD9 105 aa10.57□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Eml6Q5SQM0 1958 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Ighv1-11A0A0A6YWI9 117 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Sh2d1aO88890 126 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Fam19a1Q7TPG8 133 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Gm44965A0A0N4SVR3 59 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Med13lQ6JPI3 2207 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Fxyd5P97808 178 aa10.56□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Q9DAQ5 155 aa10.55□□□□□ -0.72
Col1a1-201ENSMUST00000001547 EnhoQ8K1D8 76 aa10.55□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Gm10226O88253 85 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Wfdc10Q3V2J9 124 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Rnf152Q8BG47 203 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Ufsp1Q9CZP0 217 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Ighv2-6A0A075B6A7 116 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Cox7bP56393 80 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 P06320 134 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 NpwA0A1L1STR8 176 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Ighv2-3A0A075B696 115 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Triap1Q9D8Z2 76 aa10.54□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Gm12689Q8BQU9 117 aa10.53□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Znf239P24399 201 aa10.53□□□□□ -0.72
Col1a1-201ENSMUST00000001547 BC107364E9Q5A2 140 aa10.53□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Wnk1P83741 2377 aa10.52□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Lypd6Q8BPP5 171 aa10.52□□□□□ -0.72
Col1a1-201ENSMUST00000001547 Psmb8P28063 276 aa10.52□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Trav14-1A0A0G2JF94 121 aa10.51□□□□□ -0.73
Col1a1-201ENSMUST00000001547 U90926O08546 118 aa10.51□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ndufb1P0DN34 57 aa10.51□□□□□ -0.73
Col1a1-201ENSMUST00000001547 A130051J06RikQ8CAU1 227 aa10.51□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ighv1-85A0A075B5Y6 117 aa10.51□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ube2d4D3YUH6 135 aa10.5□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ly6c2P0CW03 131 aa10.5□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Cfc1P97766 202 aa10.5□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Eif4ebp1Q60876 117 aa10.5□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ypel4Q65Z93 127 aa10.49□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Znf575Q3TXZ1 239 aa10.49□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Atox1O08997 68 aaKnown RBP10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 P84750 121 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 2010109I03RikQ9CQ11 111 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 PpdpfQ9CR37 115 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 4930535I16RikQ9CUI2 172 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Spry2Q9QXV8 315 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Adamts20P59511 1906 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Igkv3-12A0A140T8P0 119 aa10.48□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Tns1E9Q0S6 1888 aaKnown RBP10.47□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Dopey1Q8BL99 2399 aa10.47□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Q9D8Q6 235 aa10.47□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ighv10-3A0A075B5T6 119 aa10.46□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Plac8l1Q08EJ0 177 aa10.46□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Gm5629P06327 117 aa10.46□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Ighv10-1A0A0B4J1J6 119 aa10.46□□□□□ -0.73
Col1a1-201ENSMUST00000001547 Rnf185Q91YT2 192 aa10.46□□□□□ -0.73
Col1a1-201ENSMUST00000001547 A830005F24RikQ8BRT5 167 aa10.46□□□□□ -0.74
Col1a1-201ENSMUST00000001547 1520401A03RikA0A0J9YVH6 598 aa10.45□□□□□ -0.74
Col1a1-201ENSMUST00000001547 Ccdc179J3QM76 67 aa10.45□□□□□ -0.74
Col1a1-201ENSMUST00000001547 P01729 129 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms