RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 4930470P17RikQ9D542 155 aa13.23□□□□□ -0.29
Shroom3-211ENSMUST00000225438 PkdrejQ9Z0T6 2126 aa13.23□□□□□ -0.29
Shroom3-211ENSMUST00000225438 1700010B08RikQ9DAI7 102 aa13.23□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Trav11A0A0B4J1J9 114 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Acyp1P56376 99 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Klk5Q9D140 293 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Igkv2-109A0A075B5K6 120 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Greb1Q3UHK3 1954 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Iglv1A0A075B663 117 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Trav9n-4A0A075B631 113 aa13.22□□□□□ -0.29
Shroom3-211ENSMUST00000225438 B230359F08RikA0A0B4J1K3 109 aa13.21□□□□□ -0.29
Shroom3-211ENSMUST00000225438 Trav13n-2A0A0G2JF93 110 aa13.21□□□□□ -0.29
Shroom3-211ENSMUST00000225438 TncQ80YX1 2110 aa13.21□□□□□ -0.29
Shroom3-211ENSMUST00000225438 SonQ9QX47 2444 aaKnown RBP13.21□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Trav7-6A0A075B640 112 aa13.2□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Gvin1Q80SU7 2427 aa13.2□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Ighv1-11A0A0A6YWI9 117 aa13.2□□□□□ -0.3
Shroom3-211ENSMUST00000225438 AvpP35455 168 aa13.2□□□□□ -0.3
Shroom3-211ENSMUST00000225438 U90926O08546 118 aa13.2□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Gm10542F6XDR3 90 aa13.19□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Gphb5Q812B2 130 aa13.19□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Col8a2P25318 699 aa13.19□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Tcf20Q9EPQ8 1987 aa13.18□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Fxyd5P97808 178 aa13.18□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Gm9958Q8C9U4 106 aa13.18□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Naa38Q9D2U5 125 aa13.18□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Gm42674D3YUT9 64 aa13.17□□□□□ -0.3
Shroom3-211ENSMUST00000225438 NpyP57774 97 aa13.17□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Vpreb3D3Z6J4 130 aa13.17□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Odf3Q920N1 254 aa13.17□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Mlst8Q9DCJ1 326 aa13.17□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Igkv1-35A0A0G2JDE5 120 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Nlrc5C3VPR6 1915 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Tnfrsf23Q9ER63 176 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Wnk1P83741 2377 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 P06328 117 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Spry2Q9QXV8 315 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Defb12Q8K4N3 78 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Oxld1Q9CR10 201 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 9530003J23RikQ8BM26 151 aa13.16□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Brk1Q91VR8 75 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Ormdl1Q921I0 153 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Pcdh15Q99PJ1 1943 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Sprr3O09116 238 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 SptssbQ925E8 76 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 P01820 115 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 AW146154Q3TPQ7 468 aa13.15□□□□□ -0.3
Shroom3-211ENSMUST00000225438 Notch3Q61982 2318 aa13.14□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Pde6gP09174 87 aa13.14□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Mrpl52Q9D0Y8 121 aa13.14□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Sh2d1aO88890 126 aa13.14□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Gm10647E9Q8X0 124 aa13.13□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Gm21060J3KMU4 56 aa13.13□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Spink4O35679 86 aa13.13□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Igkv3-4A0A140T8Q4 119 aa13.13□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Ndufa4l2Q4FZG9 87 aa13.12□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Eif4ebp1Q60876 117 aa13.12□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Gm17359A0A0G2JEB7 487 aa13.12□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Gm5878E9PUB3 99 aa13.12□□□□□ -0.31
Shroom3-211ENSMUST00000225438 F5O88783 2183 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Igkv3-3A0A140T8Q0 119 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Fam19a1Q7TPG8 133 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Ufsp1Q9CZP0 217 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Gm10401E9Q3K6 71 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Lmo4P61969 165 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Ighv1-85A0A075B5Y6 117 aa13.11□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Rpl39lQ9CQD0 51 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Q9CX25 107 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 E130114P18RikF6S0S7 154 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Tfpi2O35536 230 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Ly6gP35461 111 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Ramp1Q9WTJ5 148 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Snai3Q9QY31 287 aa13.1□□□□□ -0.31
Shroom3-211ENSMUST00000225438 FshbQ60687 130 aa13.09□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Tmem254aP0DN89 123 aa13.09□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Tmem254bP0DN90 123 aa13.09□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Tmem254cP0DN91 123 aa13.09□□□□□ -0.31
Shroom3-211ENSMUST00000225438 Ighv1-75A0A075B5Y2 117 aa13.08□□□□□ -0.32
Shroom3-211ENSMUST00000225438 P01747 120 aa13.08□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Gm17521F6QAC8 156 aa13.08□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Gm26602M0QWA4 95 aa13.08□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Anapc1P53995 1944 aaKnown RBP13.08□□□□□ -0.32
Shroom3-211ENSMUST00000225438 MgamB5THE2 1827 aa13.07□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Q9D131 166 aa13.07□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Sec61gP60060 68 aa13.06□□□□□ -0.32
Shroom3-211ENSMUST00000225438 P0C913 63 aa13.06□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Ccdc179J3QM76 67 aa13.06□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Arhgef17Q80U35 2057 aa13.06□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Ncoa6Q9JL19 2067 aa13.05□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Ighv8-12A0A0G2JDE1 119 aa13.05□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Igkv8-21A0A140T8P7 120 aa13.05□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Atp5eP56382 52 aa13.05□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Vpreb2P13373 142 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Cryba4Q9JJV0 196 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Arhgap21Q6DFV3 1944 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Col5a3Q9JLI2 1739 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Ighv1-63A0A075B5X2 117 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Ighv1-82A0A0G2JEU7 117 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Ly6c2P0CW03 131 aa13.04□□□□□ -0.32
Shroom3-211ENSMUST00000225438 Gm5468Q8C3D3 155 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms