RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Lyzl4Q9D925 145 aa11.55□□□□□ -0.56
Trim39-203ENSMUST00000113706 Ighv1-62-2A0A0A6YXZ4 119 aa11.55□□□□□ -0.56
Trim39-203ENSMUST00000113706 PrlhG3UWC3 86 aa11.55□□□□□ -0.56
Trim39-203ENSMUST00000113706 B230217C12RikE9Q3Z1 139 aa11.54□□□□□ -0.56
Trim39-203ENSMUST00000113706 Ly6c2P0CW03 131 aa11.54□□□□□ -0.56
Trim39-203ENSMUST00000113706 BC025920Q3US60 128 aa11.54□□□□□ -0.56
Trim39-203ENSMUST00000113706 Smim13E9Q942 88 aa11.54□□□□□ -0.56
Trim39-203ENSMUST00000113706 GalmQ8K157 342 aa11.54□□□□□ -0.56
Trim39-203ENSMUST00000113706 Brd3osA0A1B0GRB6 84 aa11.54□□□□□ -0.56
Trim39-203ENSMUST00000113706 Rpl36-ps4A0A140T8U4 117 aa11.53□□□□□ -0.56
Trim39-203ENSMUST00000113706 Igfn1Q3KNY0 2849 aa11.53□□□□□ -0.56
Trim39-203ENSMUST00000113706 Cox6b1P56391 86 aaKnown RBP11.53□□□□□ -0.56
Trim39-203ENSMUST00000113706 Prss29Q99MS4 279 aa11.53□□□□□ -0.56
Trim39-203ENSMUST00000113706 Gm815Q3UWS2 115 aa11.52□□□□□ -0.57
Trim39-203ENSMUST00000113706 Defa9P50707 93 aa11.52□□□□□ -0.57
Trim39-203ENSMUST00000113706 Mllt11P97783 90 aa11.52□□□□□ -0.57
Trim39-203ENSMUST00000113706 Hbb-bsA8DUK4 147 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 Hbb-b1P02088 147 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 Q9D727 114 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 P06329 120 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 Tmem170bP86050 132 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm9922Q8C3P1 144 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 Mustn1Q99JI1 82 aa11.51□□□□□ -0.57
Trim39-203ENSMUST00000113706 Ighv1-85A0A075B5Y6 117 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Defb42Q8BVB5 75 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Erg28Q9ERY9 140 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 P01738 130 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 P01741 114 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Ndufs7Q9DC70 224 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Ovol2Q8CIV7 274 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Il19Q8CJ70 176 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Cby1Q9D1C2 127 aa11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Crip2Q9DCT8 208 aaKnown RBP11.5□□□□□ -0.57
Trim39-203ENSMUST00000113706 Trav9n-2A0A0G2JDP3 113 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 P01837 106 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 Nhlrc1Q8BR37 401 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 Snx22Q8C084 192 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm10509O88255 85 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 Smim1P0C8K7 78 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 Lyrm9Q3UN90 78 aa11.49□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm29289A0A087WPY7 166 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm4064A0A087WR82 380 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Igkv2-137A0A0B4J1H6 120 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm10352B2RWR6 380 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm21693J3QK27 380 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Rbmy1a1O35698 380 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 AamdcQ8R0P4 122 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Itpr2Q9Z329 2701 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 F11rO88792 300 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 SbpP15501 199 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Trav7d-3Q5R1I1 112 aa11.48□□□□□ -0.57
Trim39-203ENSMUST00000113706 Trav8-1A0A075B641 109 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 Rpl35aO55142 110 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 Q99M08 65 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 Tcrg-C3L7N479 172 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 P03985 172 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 A530064D06RikQ8BNV8 229 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 Mrpl35Q9CQL6 188 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 Pradc1Q9D9N8 188 aa11.47□□□□□ -0.57
Trim39-203ENSMUST00000113706 Notch3Q61982 2318 aa11.46□□□□□ -0.57
Trim39-203ENSMUST00000113706 Gm28044L7N1X0 119 aa11.46□□□□□ -0.57
Trim39-203ENSMUST00000113706 4930596D02RikQ3V0H9 216 aa11.46□□□□□ -0.57
Trim39-203ENSMUST00000113706 FcorP0DJI6 106 aa11.46□□□□□ -0.58
Trim39-203ENSMUST00000113706 MturnQ8CGA4 131 aa11.46□□□□□ -0.58
Trim39-203ENSMUST00000113706 Cks1brtQ3UNC9 96 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Gm1553Q66VB7 94 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Bsph2Q0Q236 131 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Defa24Q5G865 93 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Tal2Q62282 108 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Tmem263Q9DAM7 115 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Gm26727M0QWT1 121 aa11.45□□□□□ -0.58
Trim39-203ENSMUST00000113706 Gm44965A0A0N4SVR3 59 aa11.44□□□□□ -0.58
Trim39-203ENSMUST00000113706 Tnfrsf23Q9ER63 176 aa11.44□□□□□ -0.58
Trim39-203ENSMUST00000113706 Krtap16-1A2A5X5 502 aa11.43□□□□□ -0.58
Trim39-203ENSMUST00000113706 Q9D8Q6 235 aa11.43□□□□□ -0.58
Trim39-203ENSMUST00000113706 Timm17aQ9Z0V8 171 aa11.43□□□□□ -0.58
Trim39-203ENSMUST00000113706 Bak1O08734 209 aa11.43□□□□□ -0.58
Trim39-203ENSMUST00000113706 Defb45Q3V490 66 aa11.43□□□□□ -0.58
Trim39-203ENSMUST00000113706 Fam240aJ3QNP9 97 aa11.43□□□□□ -0.58
Trim39-203ENSMUST00000113706 A830031A19RikQ8BNT5 113 aa11.42□□□□□ -0.58
Trim39-203ENSMUST00000113706 Cox17P56394 63 aa11.42□□□□□ -0.58
Trim39-203ENSMUST00000113706 SrarpQ3ULG3 163 aa11.42□□□□□ -0.58
Trim39-203ENSMUST00000113706 Gm42674D3YUT9 64 aa11.41□□□□□ -0.58
Trim39-203ENSMUST00000113706 OdaphJ3QNT8 126 aa11.41□□□□□ -0.58
Trim39-203ENSMUST00000113706 TtrP07309 147 aa11.41□□□□□ -0.58
Trim39-203ENSMUST00000113706 Foxi2Q3I5G5 311 aa11.41□□□□□ -0.58
Trim39-203ENSMUST00000113706 FlnbQ80X90 2602 aaKnown RBP11.41□□□□□ -0.58
Trim39-203ENSMUST00000113706 9530053A07RikE9PVG8 2581 aa11.41□□□□□ -0.58
Trim39-203ENSMUST00000113706 AtrQ9JKK8 2635 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Fxyd5P97808 178 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Gm10295Q8CCF3 114 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Tm4sf20Q9CQY8 226 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Ankrd39Q9D2X0 183 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Plac1Q9JI83 173 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Ighv1-5A0A0A6YWG2 117 aa11.4□□□□□ -0.58
Trim39-203ENSMUST00000113706 Tex15F8VPN2 2785 aa11.4□□□□□ -0.59
Trim39-203ENSMUST00000113706 Fgfbp3Q1HCM0 245 aa11.39□□□□□ -0.59
Trim39-203ENSMUST00000113706 Gm14137Q8CE97 175 aa11.39□□□□□ -0.59
Trim39-203ENSMUST00000113706 Esm1Q9QYY7 184 aa11.39□□□□□ -0.59
Trim39-203ENSMUST00000113706 Higd1aQ9JLR9 95 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 76.5 ms