RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 TtrP07309 147 aa15.07■□□□□ 0
Ccdc88a-202ENSMUST00000109477 NpsP0C0P8 89 aa15.07■□□□□ 0
Ccdc88a-202ENSMUST00000109477 Gm9887F6RFI0 207 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 Gata1P17679 413 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 B9d2Q3UK10 175 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 Rnf114Q9ET26 229 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 Ighv1-5A0A0A6YWG2 117 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 Dand5Q76LW6 185 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 March3Q8BRX9 218 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 Tomm6Q9CQN3 74 aa15.06■□□□□ 0
Ccdc88a-202ENSMUST00000109477 1500009C09RikD3YYW9 81 aa15.05■□□□□ -0
Ccdc88a-202ENSMUST00000109477 SpxD3Z752 116 aa15.05■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Defb11Q8R2I7 77 aa15.05■□□□□ -0
Ccdc88a-202ENSMUST00000109477 D730001G18RikA0A087WQU7 115 aa15.04■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Zfp867E9Q2M4 473 aa15.04■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Tex48Q9DA81 110 aa15.04■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Gm10130F6ZHM5 101 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 4930596D02RikQ3V0H9 216 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Znf664Q4VA44 261 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Leap2Q91V13 76 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Atp5lQ9CPQ8 103 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Spry2Q9QXV8 315 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 CcsQ9WU84 274 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 6430550D23RikE9Q1X6 194 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Phxr5P08399 672 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Gpha2Q925Q5 128 aa15.03■□□□□ -0
Ccdc88a-202ENSMUST00000109477 Pmp2P24526 132 aa15.02□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Phlda3Q9WV95 125 aa15.02□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Notch1Q01705 2531 aa15.02□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Pam16Q9CQV1 125 aa15.01□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Rpl36aP83882 106 aaKnown RBP15□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Gm5868Q8BJG1 145 aa15□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Ighv8-8A0A0A6YXQ0 119 aa15□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Gm20458E9PXJ7 78 aa15□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Gng7Q61016 68 aa15□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 P01745 121 aa14.99□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Foxc1Q61572 553 aa14.99□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Tmem101Q91VP7 257 aa14.99□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Gm4707V9GXN5 68 aa14.99□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Tcrg-C1A0A075B5Z0 172 aa14.98□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Tcrg-C3L7N479 172 aa14.98□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Rpl39P62892 51 aa14.98□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Cox8bP48772 70 aa14.97□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Gm17472A0A075B683 117 aa14.97□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Klk9Q32M27 251 aa14.97□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 BC025920Q3US60 128 aa14.97□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Malsu1Q9CWV0 228 aa14.97□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Gm7257D3YX25 99 aa14.96□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 OdaphJ3QNT8 126 aa14.96□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Ifitm1Q9D103 106 aa14.96□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Cend1Q9JKC6 149 aa14.96□□□□□ -0.01
Ccdc88a-202ENSMUST00000109477 Kmt2aP55200 3966 aa14.96□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Scgb1b15A0A087WP50 93 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Ppp1r32Q148A4 427 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Prss29Q99MS4 279 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Dnah14A0A140LIJ4 4489 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 TcraP01849 138 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Ube2d3P61079 147 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Ube2d2P62838 147 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 SeboxP70368 190 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Pradc1Q9D9N8 188 aa14.95□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Trav9d-3A0A075B695 113 aa14.94□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Gm28305F6U473 122 aa14.94□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Dad1P61804 113 aa14.94□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Cib3Q0P523 160 aa14.94□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Pmis2Q497Q9 96 aa14.94□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Ifi27l2bQ8VC49 283 aa14.94□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Ighv1-59A0A0A6YXE0 117 aa14.93□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Igkv4-54A0A0G2JES9 117 aa14.93□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 F11rO88792 300 aa14.93□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Pcp4l1Q6W8Q3 68 aa14.93□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Gm5148Q8BGG2 154 aa14.93□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Chac1Q8R3J5 223 aa14.93□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Igkv4-72A0A0B4J1I4 117 aa14.92□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Nat8b-psE0CYC6 232 aa14.92□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Gm28044L7N1X0 119 aa14.92□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Josd1Q9DBJ6 202 aa14.92□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Gm10322F7D7I4 111 aa14.92□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Slc25a20Q9Z2Z6 301 aaKnown RBP14.92□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Trav13d-1A0A075B606 110 aa14.91□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Gm21370Q3T9V6 190 aa14.91□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Eif4ebp1Q60876 117 aa14.91□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 FcorP0DJI6 106 aa14.9□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Lcn2P11672 200 aa14.9□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Higd2aQ9CQJ1 106 aa14.9□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Pkd1l1Q8R526 2615 aa14.9□□□□□ -0.02
Ccdc88a-202ENSMUST00000109477 Spink4O35679 86 aa14.89□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Hspb8Q9JK92 196 aa14.89□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 P01794 123 aa14.89□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Ovol2Q8CIV7 274 aa14.89□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Timm17aQ9Z0V8 171 aa14.89□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Tmem170bP86050 132 aa14.88□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Trdv2-1A0A0G2JGB9 116 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Igkv4-61A0A0G2JH00 117 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Gm17349F7BGH6 99 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Atp5g3P56384 141 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Cox7a1P56392 80 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Atp5g1Q9CR84 136 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Higd1aQ9JLR9 95 aa14.87□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Igkv4-78A0A0A6YYE5 119 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms