RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Iglv1A0A075B663 117 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Gm9925F6T2U3 160 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Gm10518F6UQQ9 182 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Gata3P23772 443 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Rbmy1bQ60990 380 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Fam19a4Q7TPG5 135 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 C920008G01RikA0A0B4J1N1 112 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 NpyP57774 97 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 1700012A03RikQ9DAF1 130 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Gm20726G3UX18 150 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Gm10251J3QPM5 127 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Sprr3O09116 238 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Gm2916Q9D9B9 127 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Igkv8-26A0A075B5N5 123 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 B230359F08RikA0A0B4J1K3 109 aa8.42□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Glrp1E9Q9S8 174 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Cspg4Q8VHY0 2327 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Dopey1Q8BL99 2399 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Ucn2Q99ML8 113 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 P06328 117 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Cox7b2Q9D2H1 82 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Sdk1Q3UH53 2193 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Trav13-2A0A075B649 110 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Fam241bQ9D882 120 aa8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Prrc2aQ7TSC1 2158 aaKnown RBP8.41□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Rpl18aP62717 176 aaKnown RBP8.4□□□□□ -1.06
Scn8a-203ENSMUST00000108908 P84751 237 aa8.4□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Ncor2Q9WU42 2472 aaKnown RBP8.4□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Pcp4P63054 62 aa8.4□□□□□ -1.06
Scn8a-203ENSMUST00000108908 Hrct1Q9D6B9 109 aa8.4□□□□□ -1.06
Scn8a-203ENSMUST00000108908 AW146154Q3TPQ7 468 aa8.4□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Trbv16A0A0B4J1H3 115 aa8.4□□□□□ -1.07
Scn8a-203ENSMUST00000108908 PkigO70139 76 aa8.39□□□□□ -1.07
Scn8a-203ENSMUST00000108908 P01728 117 aa8.39□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Edn2P22389 175 aa8.39□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm21060J3KMU4 56 aa8.39□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Timm17aQ9Z0V8 171 aa8.39□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Plscr4P58196 326 aa8.39□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Spink10Q8CAC8 162 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Trav13-1A0A075B644 110 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm42674D3YUT9 64 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Trav9n-4A0A075B631 113 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 BB014433Q8C5R5 389 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Klk12B2RVZ0 247 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 7420426K07RikQ3UX66 186 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Wipf1Q8K1I7 493 aa8.38□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Camk2n2Q78WH7 79 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Iglc1A0A0G2JE99 106 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Igkv3-5A0A140T8M6 119 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 P01843 105 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Q9CX25 107 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Spry2Q9QXV8 315 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm10735Q3US96 136 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Q9D131 166 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Ighv1-62-2A0A0A6YXZ4 119 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm17577J3QNF7 156 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm10295Q8CCF3 114 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Obox8V9GWY9 217 aa8.37□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Trav13n-2A0A0G2JF93 110 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gphb5Q812B2 130 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 CrygcQ61597 174 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Ociad2Q9D8W7 154 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Igkv1-35A0A0G2JDE5 120 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Tcte2E9PY37 120 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Arhgap32Q811P8 2089 aa8.36□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Fam240bJ3QMB3 78 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Esm1Q9QYY7 184 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Pla2g2dQ9WVF6 144 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 AcanQ61282 2132 aaKnown RBP8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 SbsponQ3UPR9 264 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm14137Q8CE97 175 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Igkv2-109A0A075B5K6 120 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm17359A0A0G2JEB7 487 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Ly6c2P0CW03 131 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gata1P17679 413 aa8.35□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm3618D3Z4P5 127 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 P01674 108 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Cox11Q6P8I6 275 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Ndufa4l2Q4FZG9 87 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Gm9936Q8C864 160 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Igkv8-18A0A0B4J1J3 123 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Trav4-3A0A0B4J1K1 110 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Sigmar1O55242 223 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 B9d2Q3UK10 175 aa8.34□□□□□ -1.07
Scn8a-203ENSMUST00000108908 Trav7-6A0A075B640 112 aa8.33□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Golgb1E9PVZ8 3238 aa8.33□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Col27a1Q5QNQ9 1845 aa8.33□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Tmem223Q9CQE2 199 aaKnown RBP8.33□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Ube2aQ9Z255 152 aa8.33□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Cox7cP17665 63 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Ighv1-85A0A075B5Y6 117 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Q9D8Q6 235 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Tnfrsf23Q9ER63 176 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Trav4d-3A0A075B625 110 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 AngP21570 145 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Ep300B2RWS6 2412 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 1520401A03RikA0A0J9YVH6 598 aa8.32□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Pla2g2cP48076 150 aa8.31□□□□□ -1.08
Scn8a-203ENSMUST00000108908 Gm5878E9PUB3 99 aa8.31□□□□□ -1.08
Scn8a-203ENSMUST00000108908 GhrhP16043 103 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 108.4 ms