RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Igkv1-99F6XWB2 120 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-57A0A0A6YYE7 117 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm10490F6VBM2 120 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Gm2564F6Z9S8 108 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Ccl19O70460 108 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Rnf5O35445 180 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-72A0A0B4J1I4 117 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Golgb1E9PVZ8 3238 aa6.29□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Mon2Q80TL7 1715 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Prr12E9PYL2 2035 aaKnown RBP6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv8-24A0A140T8P5 121 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Lect2O88803 151 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Alpk3Q924C5 1678 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv14-111A0A140T8P9 117 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Inafm1E9PV59 130 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 P01638 115 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Tmem167aQ9CR64 72 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Igkv4-78A0A0A6YYE5 119 aa6.28□□□□□ -1.4
Clcn3-202ENSMUST00000056508 Lamb2Q61292 1799 aa6.27□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Sprr2jO70561 109 aa6.27□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Gm16485Q8C4B7 115 aa6.27□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Marf1Q8BJ34 1730 aaKnown RBP6.27□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Q9DAA7 145 aa6.27□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv8-27A0A0G2JF28 120 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv12-89A0A0G2JGW8 112 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Phxr1P15973 60 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Dlg5E9Q9R9 1921 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv10-95A0A0G2JFY3 115 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 SprnQ8BWU1 147 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv13-84A0A140T8N3 115 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Zfp831A2ADM8 1628 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv3-4A0A140T8Q4 119 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Dock11A2AF47 2073 aa6.26□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv1-110A0A0B4J1I0 119 aa6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv10-96A0A140T8M1 115 aa6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Lrp5Q91VN0 1614 aa6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Ttc3O88196 1979 aaKnown RBP6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Plch1Q4KWH5 1682 aa6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Psme4Q5SSW2 1843 aa6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Ang2Q64438 145 aa6.25□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Map2P20357 1828 aa6.24□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv8-18A0A0B4J1J3 123 aa6.24□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Ank3G5E8K5 1961 aa6.24□□□□□ -1.41
Clcn3-202ENSMUST00000056508 CnbpP53996 178 aaKnown RBP6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Znf106O88466 1888 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Numa1E9Q7G0 2094 aaKnown RBP6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv4-79A0A075B5L8 119 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 2310034G01RikA0A286YDL3 209 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Shroom3Q9QXN0 1986 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv6-15A0A140T8M5 115 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 FancmQ8BGE5 2021 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 CroccQ8CJ40 2009 aa6.23□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Defb25Q30KN8 71 aa6.22□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Myo5aQ99104 1853 aaKnown RBP6.22□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Igkv1-35A0A0G2JDE5 120 aa6.22□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Chchd7Q8K2Q5 85 aa6.22□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Nwd2Q6P5U7 1742 aa6.22□□□□□ -1.41
Clcn3-202ENSMUST00000056508 AW011738F6S7Q2 159 aa6.21□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Zfand2aQ9JII7 171 aa6.21□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Spink12Q9D256 87 aa6.21□□□□□ -1.41
Clcn3-202ENSMUST00000056508 Zfp646Q6NV66 1788 aa6.21□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv19-93A0A0G2JFZ3 115 aa6.21□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv6-32A0A140T8N9 115 aa6.21□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Gm9805F6YK59 57 aa6.21□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Golga4Q91VW5 2238 aa6.21□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Gm10881P01642 115 aa6.21□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv3-1A0A075B5P1 119 aa6.2□□□□□ -1.42
Clcn3-202ENSMUST00000056508 P0C1Z5 52 aa6.2□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Ubr2Q6WKZ8 1755 aa6.19□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Gbf1Q6DFZ1 1861 aa6.19□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Ube2d3P61079 147 aa6.19□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Defb5Q9EPV9 64 aa6.19□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Q9CX25 107 aa6.19□□□□□ -1.42
Clcn3-202ENSMUST00000056508 UtrnE9Q6R7 3430 aa6.18□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Gm5105Q8C6Y9 112 aa6.18□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv3-2A0A075B5P0 119 aa6.18□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Gm5941Q497P9 117 aa6.18□□□□□ -1.42
Clcn3-202ENSMUST00000056508 BcorQ8CGN4 1759 aa6.18□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Ndufa1O35683 70 aa6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 MgamB5THE2 1827 aa6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Vmo1Q5SXG7 201 aa6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Tet1Q3URK3 2007 aaKnown RBP6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Gm9925F6T2U3 160 aa6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 2310034C09RikQ9D746 214 aa6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Thsd7aQ69ZU6 1645 aa6.17□□□□□ -1.42
Clcn3-202ENSMUST00000056508 E130116L18RikQ8BMV6 101 aa6.16□□□□□ -1.42
Clcn3-202ENSMUST00000056508 CriptO70333 101 aa6.16□□□□□ -1.42
Clcn3-202ENSMUST00000056508 AplnQ9R0R4 77 aa6.16□□□□□ -1.42
Clcn3-202ENSMUST00000056508 C4bP01029 1738 aa6.16□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Krtap26-1Q9D7N2 215 aa6.16□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Spink6Q8BT20 105 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Ltn1Q6A009 1767 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv2-109A0A075B5K6 120 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv10-94A0A075B5L1 115 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv8-30A0A140T8M3 121 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Mast2Q60592 1734 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Pcm1Q9R0L6 2025 aa6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Togaram1Q6A070 1776 aaKnown RBP6.15□□□□□ -1.42
Clcn3-202ENSMUST00000056508 Igkv2-137A0A0B4J1H6 120 aa6.15□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm21886J3QJU9 214 aa6.15□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms