Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm25239-201ENSMUST00000174915 86 ntBASIC35.37■■■■□ 3.25
CroccQ8CJ40 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CroccQ8CJ40 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CroccQ8CJ40 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CroccQ8CJ40 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CroccQ8CJ40 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
CroccQ8CJ40 Gm15042-201ENSMUST00000120212 883 ntBASIC31.29■■■□□ 2.6
CroccQ8CJ40 Gm15045-201ENSMUST00000117359 883 ntBASIC30.97■■■□□ 2.55
CroccQ8CJ40 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CroccQ8CJ40 Psd-208ENSMUST00000224556 2034 ntBASIC30.73■■■□□ 2.51
CroccQ8CJ40 Gm24109-201ENSMUST00000175489 103 ntBASIC30.57■■■□□ 2.48
CroccQ8CJ40 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CroccQ8CJ40 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CroccQ8CJ40 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.25■■■□□ 2.43
CroccQ8CJ40 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CroccQ8CJ40 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CroccQ8CJ40 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CroccQ8CJ40 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CroccQ8CJ40 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
CroccQ8CJ40 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CroccQ8CJ40 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CroccQ8CJ40 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CroccQ8CJ40 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CroccQ8CJ40 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.52■■■□□ 2.32
CroccQ8CJ40 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CroccQ8CJ40 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CroccQ8CJ40 Gm23366-201ENSMUST00000175022 89 ntBASIC29.5■■■□□ 2.31
CroccQ8CJ40 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CroccQ8CJ40 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CroccQ8CJ40 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CroccQ8CJ40 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.17■■■□□ 2.26
CroccQ8CJ40 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CroccQ8CJ40 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CroccQ8CJ40 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CroccQ8CJ40 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CroccQ8CJ40 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CroccQ8CJ40 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CroccQ8CJ40 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
CroccQ8CJ40 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.64■■■□□ 2.17
CroccQ8CJ40 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CroccQ8CJ40 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.58■■■□□ 2.17
CroccQ8CJ40 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CroccQ8CJ40 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CroccQ8CJ40 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CroccQ8CJ40 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.27■■■□□ 2.12
CroccQ8CJ40 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CroccQ8CJ40 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CroccQ8CJ40 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.1■■■□□ 2.09
CroccQ8CJ40 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
CroccQ8CJ40 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CroccQ8CJ40 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.03■■■□□ 2.08
CroccQ8CJ40 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CroccQ8CJ40 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CroccQ8CJ40 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CroccQ8CJ40 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CroccQ8CJ40 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CroccQ8CJ40 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CroccQ8CJ40 Gm25238-201ENSMUST00000174914 89 ntBASIC27.77■■■□□ 2.04
CroccQ8CJ40 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.76■■■□□ 2.03
CroccQ8CJ40 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
CroccQ8CJ40 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
CroccQ8CJ40 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.7■■■□□ 2.02
CroccQ8CJ40 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CroccQ8CJ40 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CroccQ8CJ40 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CroccQ8CJ40 Gm27325-201ENSMUST00000175467 74 ntBASIC27.63■■■□□ 2.01
CroccQ8CJ40 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.62■■■□□ 2.01
CroccQ8CJ40 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
CroccQ8CJ40 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.58■■■□□ 2.01
CroccQ8CJ40 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CroccQ8CJ40 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.49■■□□□ 1.99
CroccQ8CJ40 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
CroccQ8CJ40 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CroccQ8CJ40 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CroccQ8CJ40 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CroccQ8CJ40 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.36■■□□□ 1.97
CroccQ8CJ40 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CroccQ8CJ40 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
CroccQ8CJ40 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.28■■□□□ 1.96
CroccQ8CJ40 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CroccQ8CJ40 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
CroccQ8CJ40 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CroccQ8CJ40 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CroccQ8CJ40 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CroccQ8CJ40 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CroccQ8CJ40 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CroccQ8CJ40 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CroccQ8CJ40 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.04■■□□□ 1.92
CroccQ8CJ40 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CroccQ8CJ40 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CroccQ8CJ40 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CroccQ8CJ40 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CroccQ8CJ40 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.97■■□□□ 1.91
CroccQ8CJ40 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CroccQ8CJ40 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CroccQ8CJ40 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CroccQ8CJ40 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CroccQ8CJ40 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CroccQ8CJ40 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
CroccQ8CJ40 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms