Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm25239-201ENSMUST00000174915 86 ntBASIC35,37■■■■□ 3,25
CroccQ8CJ40 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,08■■■□□ 2,89
CroccQ8CJ40 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,64■■■□□ 2,82
CroccQ8CJ40 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,72
CroccQ8CJ40 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,96■■■□□ 2,71
CroccQ8CJ40 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,89■■■□□ 2,7
CroccQ8CJ40 Gm15042-201ENSMUST00000120212 883 ntBASIC31,29■■■□□ 2,6
CroccQ8CJ40 Gm15045-201ENSMUST00000117359 883 ntBASIC30,97■■■□□ 2,55
CroccQ8CJ40 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
CroccQ8CJ40 Psd-208ENSMUST00000224556 2034 ntBASIC30,73■■■□□ 2,51
CroccQ8CJ40 Gm24109-201ENSMUST00000175489 103 ntBASIC30,57■■■□□ 2,48
CroccQ8CJ40 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
CroccQ8CJ40 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
CroccQ8CJ40 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,25■■■□□ 2,43
CroccQ8CJ40 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
CroccQ8CJ40 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,92■■■□□ 2,38
CroccQ8CJ40 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,79■■■□□ 2,36
CroccQ8CJ40 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
CroccQ8CJ40 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,57■■■□□ 2,32
CroccQ8CJ40 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
CroccQ8CJ40 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
CroccQ8CJ40 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
CroccQ8CJ40 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
CroccQ8CJ40 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,52■■■□□ 2,32
CroccQ8CJ40 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,5■■■□□ 2,31
CroccQ8CJ40 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,5■■■□□ 2,31
CroccQ8CJ40 Gm23366-201ENSMUST00000175022 89 ntBASIC29,5■■■□□ 2,31
CroccQ8CJ40 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,43■■■□□ 2,3
CroccQ8CJ40 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
CroccQ8CJ40 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
CroccQ8CJ40 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,17■■■□□ 2,26
CroccQ8CJ40 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
CroccQ8CJ40 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
CroccQ8CJ40 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
CroccQ8CJ40 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,99■■■□□ 2,23
CroccQ8CJ40 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,84■■■□□ 2,21
CroccQ8CJ40 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
CroccQ8CJ40 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,68■■■□□ 2,18
CroccQ8CJ40 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,64■■■□□ 2,17
CroccQ8CJ40 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,63■■■□□ 2,17
CroccQ8CJ40 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,58■■■□□ 2,17
CroccQ8CJ40 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
CroccQ8CJ40 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,4■■■□□ 2,14
CroccQ8CJ40 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
CroccQ8CJ40 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,27■■■□□ 2,12
CroccQ8CJ40 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,22■■■□□ 2,11
CroccQ8CJ40 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
CroccQ8CJ40 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,1■■■□□ 2,09
CroccQ8CJ40 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,07■■■□□ 2,08
CroccQ8CJ40 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,04■■■□□ 2,08
CroccQ8CJ40 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,03■■■□□ 2,08
CroccQ8CJ40 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
CroccQ8CJ40 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
CroccQ8CJ40 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
CroccQ8CJ40 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,96■■■□□ 2,07
CroccQ8CJ40 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
CroccQ8CJ40 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,83■■■□□ 2,05
CroccQ8CJ40 Gm25238-201ENSMUST00000174914 89 ntBASIC27,77■■■□□ 2,04
CroccQ8CJ40 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,76■■■□□ 2,03
CroccQ8CJ40 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27,74■■■□□ 2,03
CroccQ8CJ40 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,73■■■□□ 2,03
CroccQ8CJ40 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,7■■■□□ 2,02
CroccQ8CJ40 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,67■■■□□ 2,02
CroccQ8CJ40 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27,65■■■□□ 2,02
CroccQ8CJ40 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,65■■■□□ 2,02
CroccQ8CJ40 Gm27325-201ENSMUST00000175467 74 ntBASIC27,63■■■□□ 2,01
CroccQ8CJ40 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,62■■■□□ 2,01
CroccQ8CJ40 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,61■■■□□ 2,01
CroccQ8CJ40 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,58■■■□□ 2,01
CroccQ8CJ40 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
CroccQ8CJ40 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,49■■□□□ 1,99
CroccQ8CJ40 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,48■■□□□ 1,99
CroccQ8CJ40 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27,48■■□□□ 1,99
CroccQ8CJ40 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27,46■■□□□ 1,99
CroccQ8CJ40 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,42■■□□□ 1,98
CroccQ8CJ40 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,36■■□□□ 1,97
CroccQ8CJ40 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,97
CroccQ8CJ40 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27,33■■□□□ 1,97
CroccQ8CJ40 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27,28■■□□□ 1,96
CroccQ8CJ40 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27,27■■□□□ 1,96
CroccQ8CJ40 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,19■■□□□ 1,94
CroccQ8CJ40 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
CroccQ8CJ40 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
CroccQ8CJ40 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
CroccQ8CJ40 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27,08■■□□□ 1,93
CroccQ8CJ40 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
CroccQ8CJ40 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
CroccQ8CJ40 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27,04■■□□□ 1,92
CroccQ8CJ40 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,92
CroccQ8CJ40 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,01■■□□□ 1,91
CroccQ8CJ40 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1,91
CroccQ8CJ40 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
CroccQ8CJ40 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,97■■□□□ 1,91
CroccQ8CJ40 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
CroccQ8CJ40 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,9■■□□□ 1,9
CroccQ8CJ40 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,89■■□□□ 1,9
CroccQ8CJ40 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
CroccQ8CJ40 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
CroccQ8CJ40 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,83■■□□□ 1,88
CroccQ8CJ40 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,83■■□□□ 1,88
Retrieved 100 of 76,532 protein–RNA pairs in 13,9 ms