RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Tet1Q3URK3 2007 aaKnown RBP13.42□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Sprr3O09116 238 aa13.42□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Trav9n-4A0A075B631 113 aa13.42□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Gphb5Q812B2 130 aa13.42□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Trav13-1A0A075B644 110 aa13.42□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Trav4-3A0A0B4J1K1 110 aa13.41□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 B230359F08RikA0A0B4J1K3 109 aa13.41□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Fgf6P21658 208 aa13.41□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Tmem243B2RVB9 118 aa13.41□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Obox8V9GWY9 217 aa13.41□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Gm10647E9Q8X0 124 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Fam240bJ3QMB3 78 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Sh2d1aO88890 126 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 FshbQ60687 130 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Klk12B2RVZ0 247 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 9430069I07RikQ9CX21 111 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 7420426K07RikQ3UX66 186 aa13.4□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Gm9925F6T2U3 160 aa13.39□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Gm10542F6XDR3 90 aa13.39□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Rbm3O89086 153 aaKnown RBP13.39□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 E130114P18RikF6S0S7 154 aa13.39□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Dkk4Q8VEJ3 221 aa13.39□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Gm20726G3UX18 150 aa13.38□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Arhgef17Q80U35 2057 aa13.38□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Col24a1Q30D77 1733 aa13.38□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Gm37389A0A0A6YW05 95 aa13.38□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Trav13n-2A0A0G2JF93 110 aa13.38□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Parp4E9PYK3 1969 aa13.37□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Notch3Q61982 2318 aa13.37□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Dopey1Q8BL99 2399 aa13.37□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Igkv2-109A0A075B5K6 120 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 P06328 117 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Spink10Q8CAC8 162 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Oxld1Q9CR10 201 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Ighv1-11A0A0A6YWI9 117 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Cspg4Q8VHY0 2327 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Fxyd5P97808 178 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Hrct1Q9D6B9 109 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 CrygdP04342 174 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 AW146154Q3TPQ7 468 aa13.36□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Cox7cP17665 63 aa13.35□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 TectaO08523 2155 aa13.35□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Gm12353A2AGJ4 60 aa13.35□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Mlst8Q9DCJ1 326 aa13.34□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Ly6c2P0CW03 131 aa13.34□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Odf3Q920N1 254 aa13.34□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 AngP21570 145 aa13.33□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Q9CX25 107 aa13.33□□□□□ -0.27
Pcdhac2-201ENSMUST00000047479 Trav7-6A0A075B640 112 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Tmem258P61166 79 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 E130116L18RikQ8BMV6 101 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Spg11Q3UHA3 2430 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 P01747 120 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Ncoa6Q9JL19 2067 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Gm10295Q8CCF3 114 aa13.33□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 PscaP57096 123 aa13.32□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Fam222aQ6PGH4 453 aa13.32□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 1700010B08RikQ9DAI7 102 aa13.32□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Iglc1A0A0G2JE99 106 aa13.32□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 P01843 105 aa13.32□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Fam19a1Q7TPG8 133 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Gm4707V9GXN5 68 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Gm42674D3YUT9 64 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Esm1Q9QYY7 184 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Med13lQ6JPI3 2207 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Igkv1-35A0A0G2JDE5 120 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Igkv3-4A0A140T8Q4 119 aa13.31□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Ighv1-85A0A075B5Y6 117 aa13.3□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 SbsponQ3UPR9 264 aa13.3□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Col4a6B1AVK5 1691 aa13.3□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Gm21060J3KMU4 56 aa13.29□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Gm5878E9PUB3 99 aa13.29□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Spink8Q09TK9 105 aa13.29□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Ufsp1Q9CZP0 217 aa13.29□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 NpyP57774 97 aa13.29□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 9530003J23RikQ8BM26 151 aa13.28□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Cryba4Q9JJV0 196 aa13.28□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Ighv1-63A0A075B5X2 117 aa13.28□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Tcte2E9PY37 120 aa13.28□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Igkv3-3A0A140T8Q0 119 aa13.27□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Ndufa4l2Q4FZG9 87 aa13.27□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Trav11A0A0B4J1J9 114 aa13.27□□□□□ -0.28
Pcdhac2-201ENSMUST00000047479 Pla2g2dQ9WVF6 144 aa13.27□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Ighv1-62-2A0A0A6YXZ4 119 aa13.26□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Gm17359A0A0G2JEB7 487 aa13.26□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Ly6gP35461 111 aa13.26□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Defb12Q8K4N3 78 aa13.26□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Pla2g2cP48076 150 aa13.26□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Q9D8Q6 235 aa13.26□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Notch4P31695 1964 aa13.25□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Acyp1P56376 99 aa13.25□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Wdr90Q6ZPG2 1874 aa13.25□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Ighv1-75A0A075B5Y2 117 aa13.25□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Nup210Q9QY81 1886 aaKnown RBP13.24□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Ighv2-3A0A075B696 115 aa13.24□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Vpreb3D3Z6J4 130 aa13.24□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Q9D131 166 aa13.24□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Naa38Q9D2U5 125 aa13.24□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 P01658 132 aa13.24□□□□□ -0.29
Pcdhac2-201ENSMUST00000047479 Prr12E9PYL2 2035 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms