RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Trav13d-4A0A0G2JFX3 110 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Igkv4-61A0A0G2JH00 117 aa8.85□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Ramp1Q9WTJ5 148 aa8.85□□□□□ -0.99
Pcif1-201ENSMUST00000041643 4930415O20RikQ8CDT5 131 aa8.85□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Tm2d2Q8R0I4 213 aa8.85□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Rpl32-psP17932 135 aa8.85□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Med13lQ6JPI3 2207 aa8.85□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Gm42715A0A087WP63 3095 aaKnown RBP8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Pxt1Q8K459 51 aa8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Snai3Q9QY31 287 aa8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 OtoglF7A4A7 2325 aa8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 PrlhG3UWC3 86 aa8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Reg3bP35230 175 aa8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Lage3Q9CR70 148 aa8.84□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Lgals4Q8K419 326 aa8.84□□□□□ -1
Pcif1-201ENSMUST00000041643 Mpv17l2Q8VIK2 200 aa8.84□□□□□ -1
Pcif1-201ENSMUST00000041643 Clec4b2Q67DU8 208 aa8.83□□□□□ -1
Pcif1-201ENSMUST00000041643 Prr9Q8BV84 116 aa8.83□□□□□ -1
Pcif1-201ENSMUST00000041643 Ighv1-85A0A075B5Y6 117 aa8.83□□□□□ -1
Pcif1-201ENSMUST00000041643 P01837 106 aa8.83□□□□□ -1
Pcif1-201ENSMUST00000041643 Socs3O35718 225 aa8.82□□□□□ -1
Pcif1-201ENSMUST00000041643 TshbP12656 138 aa8.82□□□□□ -1
Pcif1-201ENSMUST00000041643 Piezo2Q8CD54 2822 aa8.82□□□□□ -1
Pcif1-201ENSMUST00000041643 Spg11Q3UHA3 2430 aa8.82□□□□□ -1
Pcif1-201ENSMUST00000041643 MalO09198 153 aa8.82□□□□□ -1
Pcif1-201ENSMUST00000041643 Defa1P11477 93 aa8.82□□□□□ -1
Pcif1-201ENSMUST00000041643 Trav13-4-dv7A0A075B6C2 110 aa8.81□□□□□ -1
Pcif1-201ENSMUST00000041643 C1qcQ02105 246 aa8.81□□□□□ -1
Pcif1-201ENSMUST00000041643 Tmem223Q9CQE2 199 aaKnown RBP8.81□□□□□ -1
Pcif1-201ENSMUST00000041643 Tcf24V9GWT9 166 aa8.81□□□□□ -1
Pcif1-201ENSMUST00000041643 Fam241bQ9D882 120 aa8.81□□□□□ -1
Pcif1-201ENSMUST00000041643 Gm10542F6XDR3 90 aa8.8□□□□□ -1
Pcif1-201ENSMUST00000041643 Ighv1-11A0A0A6YWI9 117 aa8.8□□□□□ -1
Pcif1-201ENSMUST00000041643 Gm9936Q8C864 160 aa8.8□□□□□ -1
Pcif1-201ENSMUST00000041643 Anapc13Q8R034 74 aa8.8□□□□□ -1
Pcif1-201ENSMUST00000041643 Rnf185Q91YT2 192 aa8.8□□□□□ -1
Pcif1-201ENSMUST00000041643 Trav13n-1A0A0G2JEU8 110 aa8.8□□□□□ -1
Pcif1-201ENSMUST00000041643 Mtatp8P03930 67 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Ypel4Q65Z93 127 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Ndufa12Q7TMF3 145 aaKnown RBP8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 B430305J03RikQ8BQQ8 176 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Gm17359A0A0G2JEB7 487 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Gm10604Q3V0X7 143 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Ighv1-5A0A0A6YWG2 117 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Ighv3-3A0A0A6YWL2 116 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Igkv4-72A0A0B4J1I4 117 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 A930009A15RikG3UYI6 118 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Wfdc2Q9DAU7 174 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Wnk1P83741 2377 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 CrygfQ9CXV3 174 aa8.79□□□□□ -1
Pcif1-201ENSMUST00000041643 Trav9n-4A0A075B631 113 aa8.78□□□□□ -1
Pcif1-201ENSMUST00000041643 LhbO09108 141 aa8.78□□□□□ -1
Pcif1-201ENSMUST00000041643 Igkv4-79A0A075B5L8 119 aa8.78□□□□□ -1
Pcif1-201ENSMUST00000041643 Ndufa3Q9CQ91 84 aa8.78□□□□□ -1
Pcif1-201ENSMUST00000041643 Gm4707V9GXN5 68 aa8.78□□□□□ -1
Pcif1-201ENSMUST00000041643 Qrich2A0A140LIY9 2337 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm10647E9Q8X0 124 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gatd1Q8BFQ8 220 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Defb29Q8BGW9 78 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 SelenowP63300 88 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Ube2wQ8VDW4 151 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Igkv4-54A0A0G2JES9 117 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Mfap4Q9D1H9 257 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Cox7b2Q9D2H1 82 aa8.77□□□□□ -1.01
Pcif1-201ENSMUST00000041643 C920008G01RikA0A0B4J1N1 112 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Igkv4-69A0A0B4J1I6 116 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Eif4ebp1Q60876 117 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 9430069I07RikQ9CX21 111 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm28269A0A087WSG3 125 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Igkv4-53A0A0G2JFC6 119 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Defb10Q8R2I8 73 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Runx1Q03347 451 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Pglyrp4Q0VB07 374 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Trav3-1Q5R1I8 114 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Trav4-3A0A0B4J1K1 110 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm5464Q3UY29 175 aa8.76□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Dido1Q8C9B9 2256 aaKnown RBP8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 P01729 129 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Ly6gP35461 111 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Glrp1E9Q9S8 174 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Lst1O08843 95 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Insl3O09107 122 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm10295Q8CCF3 114 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm42674D3YUT9 64 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm5629P06327 117 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 4930546C10RikE9Q4Y3 121 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Cd33Q63994 403 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Ighv2-6A0A075B6A7 116 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Igkv4-78A0A0A6YYE5 119 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Ube2bP63147 152 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Defb42Q8BVB5 75 aa8.75□□□□□ -1.01
Pcif1-201ENSMUST00000041643 B230359F08RikA0A0B4J1K3 109 aa8.74□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Ighv8-12A0A0G2JDE1 119 aa8.74□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm10518F6UQQ9 182 aa8.74□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Cryba4Q9JJV0 196 aa8.74□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Camk2n2Q78WH7 79 aa8.74□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm10490F6VBM2 120 aa8.73□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Hist1h4aP62806 103 aaKnown RBP8.73□□□□□ -1.01
Pcif1-201ENSMUST00000041643 1700012A03RikQ9DAF1 130 aa8.73□□□□□ -1.01
Pcif1-201ENSMUST00000041643 Gm3443F7CCV5 94 aa8.73□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 146.9 ms