RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Q5BN45 167 aa13.52□□□□□ -0.24
Ccdc3-201ENSMUST00000027988 Ighv8-12A0A0G2JDE1 119 aa13.52□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 A930009A15RikG3UYI6 118 aa13.52□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Insl3O09107 122 aa13.52□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Cd69P37217 199 aa13.52□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Sigmar1O55242 223 aa13.51□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Snrpd3P62320 126 aaKnown RBP13.51□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 4930596D02RikQ3V0H9 216 aa13.51□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Srsf9Q9D0B0 222 aaKnown RBP13.51□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Igfn1Q3KNY0 2849 aa13.5□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Gm10490F6VBM2 120 aa13.49□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Dpm2Q9Z324 84 aa13.49□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Ighv1-85A0A075B5Y6 117 aa13.49□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 C920008G01RikA0A0B4J1N1 112 aa13.49□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Fam19a4Q7TPG5 135 aa13.49□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Zc2hc1bQ9D534 172 aa13.49□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Esp24A8R0V6 68 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Smr3aQ61900 147 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Mrpl35Q9CQL6 188 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Gemin7Q9CWY4 129 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Tnfrsf23Q9ER63 176 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Higd1aQ9JLR9 95 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Timm17aQ9Z0V8 171 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 4930564D02RikQ9D4S4 103 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Arid1bE9Q4N7 2244 aa13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Usp24B1AY13 2617 aaKnown RBP13.48□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 P01811 117 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Pdzd2E9Q1M1 2796 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Gm35549A0A0N4SUS7 141 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Synj2bpQ9D6K5 145 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Hectd1Q69ZR2 2618 aaKnown RBP13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 BsnO88737 3942 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 B230217C12RikE9Q3Z1 139 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 NrepQ07475 68 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Fam216aQ9DB54 251 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Ccl24Q9JKC0 119 aa13.47□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Ube2d3P61079 147 aa13.46□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Ube2d2P62838 147 aa13.46□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Mpv17l2Q8VIK2 200 aa13.46□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Notch3Q61982 2318 aa13.46□□□□□ -0.25
Ccdc3-201ENSMUST00000027988 Ighv8-5A0A0A6YY60 119 aa13.46□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Fhl2O70433 279 aa13.46□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Defb18Q30KP5 85 aa13.46□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Gm9913Q8BQQ2 135 aa13.46□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Dynlrb2Q9DAJ5 96 aa13.46□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Rab37Q9JKM7 223 aa13.46□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 BC067074F6RXI4 2391 aa13.45□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 A530064D06RikQ8BNV8 229 aa13.45□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 LbhQ9CX60 105 aa13.45□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Gm28269A0A087WSG3 125 aa13.45□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 2310009B15RikA0A0A6YWI4 143 aa13.45□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Trav4n-4A0A075B615 110 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 P06329 120 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 CckP09240 115 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Tmem263Q9DAM7 115 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Gm45785A0A1B0GT05 94 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Gm6812B1AXU1 112 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Mfap4Q9D1H9 257 aa13.44□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 BC106179Q8C9L1 186 aa13.43□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Helz2E9QAM5 2947 aaKnown RBP13.43□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Il1f10Q8R459 152 aa13.43□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Ighv1-5A0A0A6YWG2 117 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Gm45717A0A1B0GT68 152 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Reg3gO09049 174 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Lect2O88803 151 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 LeprotO89013 131 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Runx1Q03347 451 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 NpwA0A1L1STR8 176 aa13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Crip2Q9DCT8 208 aaKnown RBP13.42□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Krtap27-1E9PX37 202 aa13.41□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Dmrt3Q80WT2 476 aa13.41□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Ang3P97802 145 aa13.41□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 TtrP07309 147 aa13.4□□□□□ -0.26
Ccdc3-201ENSMUST00000027988 Cox8cA6H666 72 aa13.39□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 P84751 237 aa13.39□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Ube2e2Q91W82 201 aa13.39□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Ighv5-9-1A0A0A6YVS4 126 aa13.38□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Igkv4-68A0A0B4J1I7 117 aa13.38□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Morn5Q9DAI9 170 aa13.38□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Srsf12Q8C8K3 266 aa13.37□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 4930470P17RikQ9D542 155 aa13.37□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Dmbt1Q60997 2085 aa13.37□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Gm9513B3GLJ6 99 aa13.36□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Cfap126Q6P8X9 189 aa13.36□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Cdip1Q9DB75 208 aa13.36□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Defb47Q30KN1 79 aa13.36□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Gm20730A0A075B5J6 119 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Trav9n-2A0A0G2JDP3 113 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Gm10509O88255 85 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Gata1P17679 413 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Trav13d-1A0A075B606 110 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Gm10135F6TEE5 83 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Psmb8P28063 276 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Ucn2Q99ML8 113 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 3110070M22RikQ9DAQ7 118 aa13.35□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Ifitm10Q8BR26 201 aa13.34□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Col7a1Q63870 2944 aa13.34□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Gm5819E9PZ96 154 aa13.34□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Klk1b4P00757 256 aa13.34□□□□□ -0.27
Ccdc3-201ENSMUST00000027988 Avpi1Q9D7H4 142 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms