RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 FlnaQ8BTM8 2647 aaKnown RBP8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Trav9n-2A0A0G2JDP3 113 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Ccl25O35903 144 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 TtrP07309 147 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 P01837 106 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Trav7d-3Q5R1I1 112 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Spink13Q3UTS8 97 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Trav2Q5R1I9 109 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Anapc13Q8R034 74 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Gemin7Q9CWY4 129 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Synj2bpQ9D6K5 145 aa8.6□□□□□ -1.03
Herc4-201ENSMUST00000020258 Cks1bP61025 79 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 Celsr2Q9R0M0 2920 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 Pla2g2aP31482 146 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 SrarpQ3ULG3 163 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 Klk5Q9D140 293 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 Lelp1Q9DAE3 120 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 Itpr3P70227 2670 aa8.59□□□□□ -1.03
Herc4-201ENSMUST00000020258 Gm6812B1AXU1 112 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Defb26Q30KN7 186 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Cox11Q6P8I6 275 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Cox7cP17665 63 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm94Q3V2D2 93 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Odf1Q61999 247 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Tcte2E9PY37 120 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Sprr3O09116 238 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Tmem263Q9DAM7 115 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Dpm2Q9Z324 84 aa8.58□□□□□ -1.04
Herc4-201ENSMUST00000020258 Igkv4-70A0A0B4J1I5 116 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm45717A0A1B0GT68 152 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Igkv4-71A0A0G2JEH0 117 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm9913Q8BQQ2 135 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Mrpl35Q9CQL6 188 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm21748Q3UE70 102 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Znf740Q6NZQ6 180 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Dmrt3Q80WT2 476 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 Phlda3Q9WV95 125 aa8.57□□□□□ -1.04
Herc4-201ENSMUST00000020258 1700020N15RikL7MTX3 112 aa8.56□□□□□ -1.04
Herc4-201ENSMUST00000020258 FcorP0DJI6 106 aa8.56□□□□□ -1.04
Herc4-201ENSMUST00000020258 Bles03Q8VD62 251 aa8.56□□□□□ -1.04
Herc4-201ENSMUST00000020258 SNORCQ9CXL7 121 aa8.56□□□□□ -1.04
Herc4-201ENSMUST00000020258 Mpv17l2Q8VIK2 200 aa8.56□□□□□ -1.04
Herc4-201ENSMUST00000020258 Lyzl4Q9D925 145 aa8.56□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm9925F6T2U3 160 aa8.55□□□□□ -1.04
Herc4-201ENSMUST00000020258 Pla2g2cP48076 150 aa8.55□□□□□ -1.04
Herc4-201ENSMUST00000020258 Rpl35aO55142 110 aa8.55□□□□□ -1.04
Herc4-201ENSMUST00000020258 1500011B03RikQ3TTH7 73 aa8.55□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm815Q3UWS2 115 aa8.55□□□□□ -1.04
Herc4-201ENSMUST00000020258 Tspan13Q9D8C2 204 aa8.55□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm37988J3QM41 62 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Trav3-1Q5R1I8 114 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm4861Q8C5A4 106 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 4930415O20RikQ8CDT5 131 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Tac4Q99N14 128 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Prh1P05142 261 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Defa1P11477 93 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Ss18Q62280 418 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Rnf183Q8QZS5 190 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Ighv1-52A0A0A6YXC3 117 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Socs3O35718 225 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Pip4p1Q3TWL2 284 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Shisa9Q9CZN4 424 aa8.54□□□□□ -1.04
Herc4-201ENSMUST00000020258 Ighv2-3A0A075B696 115 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm5464Q3UY29 175 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Ccl24Q9JKC0 119 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Smim1P0C8K7 78 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Prr9Q8BV84 116 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Fam216aQ9DB54 251 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Srsf2Q62093 221 aaKnown RBP8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Il1f10Q8R459 152 aa8.53□□□□□ -1.04
Herc4-201ENSMUST00000020258 Gm20499D3Z4G5 72 aa8.52□□□□□ -1.05
Herc4-201ENSMUST00000020258 Smim10l1A0A087WNQ7 89 aa8.52□□□□□ -1.05
Herc4-201ENSMUST00000020258 Trav13n-1A0A0G2JEU8 110 aa8.52□□□□□ -1.05
Herc4-201ENSMUST00000020258 Gm10767Q3TQP0 103 aa8.52□□□□□ -1.05
Herc4-201ENSMUST00000020258 Gm10542F6XDR3 90 aa8.52□□□□□ -1.05
Herc4-201ENSMUST00000020258 Spink12Q9D256 87 aa8.52□□□□□ -1.05
Herc4-201ENSMUST00000020258 Tep1P97499 2629 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 PtprqP0C5E4 2300 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 Fam222aQ6PGH4 453 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 A530064D06RikQ8BNV8 229 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 Cyyr1Q8VIH7 165 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 Ly86O88188 162 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 P84751 237 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 Xlr5cQ9JJR2 179 aa8.51□□□□□ -1.05
Herc4-201ENSMUST00000020258 Scgb1b24B1B0N6 92 aa8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 Pfn2Q9JJV2 140 aa8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 NipblQ6KCD5 2798 aaKnown RBP8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 P01738 130 aa8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 Ankrd17Q99NH0 2603 aaKnown RBP8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 Trbv30A0A0B4J1P1 111 aa8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 4930470P17RikQ9D542 155 aa8.5□□□□□ -1.05
Herc4-201ENSMUST00000020258 Trav9d-3A0A075B695 113 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 Ighv1-72P01751 139 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 CnfnQ6PCW6 111 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 SpinklQ8CEK3 90 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 Tomm7Q9D173 55 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 Trav7-6A0A075B640 112 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 GalmQ8K157 342 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 Gm7075D3Z497 112 aa8.49□□□□□ -1.05
Herc4-201ENSMUST00000020258 Nhlrc1Q8BR37 401 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 75.2 ms