RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Rhox8Q6VSS7 320 aa20.75■□□□□ 0.91
Herc4-201ENSMUST00000020258 NischQ80TM9 1593 aa20.25■□□□□ 0.83
Herc4-201ENSMUST00000020258 Ehmt2Q9Z148 1263 aaKnown RBP19.47■□□□□ 0.71
Herc4-201ENSMUST00000020258 Abcc9P70170 1546 aa19.31■□□□□ 0.68
Herc4-201ENSMUST00000020258 Ccdc136Q3TVA9 1136 aa19.1■□□□□ 0.65
Herc4-201ENSMUST00000020258 Abcc8B2RUS7 1588 aa18.9■□□□□ 0.62
Herc4-201ENSMUST00000020258 Gm35339A0A140LHH9 1649 aa18.71■□□□□ 0.59
Herc4-201ENSMUST00000020258 Rpgrip1Q9EPQ2 1331 aa18.68■□□□□ 0.58
Herc4-201ENSMUST00000020258 Ccdc180J3QNE4 1664 aa18.57■□□□□ 0.56
Herc4-201ENSMUST00000020258 Trim41Q5NCC3 630 aa18.48■□□□□ 0.55
Herc4-201ENSMUST00000020258 Acin1Q9JIX8 1338 aaKnown RBP18.45■□□□□ 0.54
Herc4-201ENSMUST00000020258 Rtl1Q7M732 1744 aa18.44■□□□□ 0.54
Herc4-201ENSMUST00000020258 Gab3Q8BSM5 595 aa18.38■□□□□ 0.53
Herc4-201ENSMUST00000020258 Cngb1E1AZ71 1325 aa18.29■□□□□ 0.52
Herc4-201ENSMUST00000020258 HrcG5E8J6 738 aa18.14■□□□□ 0.49
Herc4-201ENSMUST00000020258 Zeb1Q64318 1117 aa18.14■□□□□ 0.49
Herc4-201ENSMUST00000020258 Pcgf6Q99NA9 353 aa18.09■□□□□ 0.49
Herc4-201ENSMUST00000020258 Zcchc6Q5BLK4 1491 aaKnown RBP17.96■□□□□ 0.47
Herc4-201ENSMUST00000020258 Esf1Q3V1V3 845 aaKnown RBP17.94■□□□□ 0.46
Herc4-201ENSMUST00000020258 Supt5hO55201 1082 aaKnown RBP17.88■□□□□ 0.45
Herc4-201ENSMUST00000020258 Rb1cc1Q9ESK9 1588 aa17.78■□□□□ 0.44
Herc4-201ENSMUST00000020258 Dcaf1Q80TR8 1506 aa17.78■□□□□ 0.44
Herc4-201ENSMUST00000020258 Wdr66E9Q743 1299 aa17.71■□□□□ 0.43
Herc4-201ENSMUST00000020258 Myt1lP97500 1187 aa17.7■□□□□ 0.42
Herc4-201ENSMUST00000020258 Chic1Q8CBW7 227 aa17.69■□□□□ 0.42
Herc4-201ENSMUST00000020258 UbtfP25976 765 aaKnown RBP17.67■□□□□ 0.42
Herc4-201ENSMUST00000020258 Ppargc1bQ8VHJ7 1014 aa17.66■□□□□ 0.42
Herc4-201ENSMUST00000020258 Mier1Q5UAK0 511 aa17.52■□□□□ 0.39
Herc4-201ENSMUST00000020258 Npm2Q80W85 207 aa17.45■□□□□ 0.38
Herc4-201ENSMUST00000020258 Las1lA2BE28 776 aaKnown RBP17.4■□□□□ 0.38
Herc4-201ENSMUST00000020258 Baz1aO88379 1555 aa17.39■□□□□ 0.37
Herc4-201ENSMUST00000020258 Kdm5dQ62240 1548 aa17.39■□□□□ 0.37
Herc4-201ENSMUST00000020258 Cep164Q5DU05 1446 aa17.39■□□□□ 0.37
Herc4-201ENSMUST00000020258 Neurod1Q60867 357 aa17.39■□□□□ 0.37
Herc4-201ENSMUST00000020258 NefmP08553 848 aa17.38■□□□□ 0.37
Herc4-201ENSMUST00000020258 ScribQ80U72 1612 aa17.36■□□□□ 0.37
Herc4-201ENSMUST00000020258 Sall2Q9QX96 1004 aa17.3■□□□□ 0.36
Herc4-201ENSMUST00000020258 Rsf1E9PWW9 1441 aaKnown RBP17.25■□□□□ 0.35
Herc4-201ENSMUST00000020258 NacadQ5SWP3 1504 aa17.19■□□□□ 0.34
Herc4-201ENSMUST00000020258 Il27Q8K3I6 234 aa17.19■□□□□ 0.34
Herc4-201ENSMUST00000020258 Ap3b1Q9Z1T1 1105 aa17.17■□□□□ 0.34
Herc4-201ENSMUST00000020258 Plekhg3Q4VAC9 1341 aa17.13■□□□□ 0.33
Herc4-201ENSMUST00000020258 Ccdc88bQ4QRL3 1481 aa17.1■□□□□ 0.33
Herc4-201ENSMUST00000020258 Brd4Q9ESU6 1400 aaKnown RBP17.06■□□□□ 0.32
Herc4-201ENSMUST00000020258 Aebp2Q9Z248 504 aaKnown RBP17.03■□□□□ 0.32
Herc4-201ENSMUST00000020258 Gm38655A0A286YDK6 273 aa17.02■□□□□ 0.32
Herc4-201ENSMUST00000020258 Nop58Q6DFW4 536 aaKnown RBP17■□□□□ 0.31
Herc4-201ENSMUST00000020258 Cdk11bP24788 784 aaKnown RBP17■□□□□ 0.31
Herc4-201ENSMUST00000020258 Csrnp3P59055 597 aa16.97■□□□□ 0.31
Herc4-201ENSMUST00000020258 Eid3Q3V124 375 aa16.97■□□□□ 0.31
Herc4-201ENSMUST00000020258 Mapk8ip2Q9ERE9 830 aa16.94■□□□□ 0.3
Herc4-201ENSMUST00000020258 Cecr2E9Q2Z1 1453 aa16.94■□□□□ 0.3
Herc4-201ENSMUST00000020258 Golga3P55937 1487 aa16.91■□□□□ 0.3
Herc4-201ENSMUST00000020258 Ube2uB1AUC4 352 aa16.91■□□□□ 0.3
Herc4-201ENSMUST00000020258 TonslQ6NZL6 1363 aa16.9■□□□□ 0.3
Herc4-201ENSMUST00000020258 Smarca2Q6DIC0 1577 aa16.87■□□□□ 0.29
Herc4-201ENSMUST00000020258 Fam50aQ9WV03 339 aaKnown RBP16.82■□□□□ 0.28
Herc4-201ENSMUST00000020258 Slc24a1Q91WD8 1130 aa16.78■□□□□ 0.28
Herc4-201ENSMUST00000020258 ClspnQ80YR7 1315 aa16.77■□□□□ 0.27
Herc4-201ENSMUST00000020258 Lmod2Q3UHZ5 550 aa16.74■□□□□ 0.27
Herc4-201ENSMUST00000020258 Clip1Q922J3 1391 aa16.74■□□□□ 0.27
Herc4-201ENSMUST00000020258 Sycp2Q9CUU3 1500 aa16.73■□□□□ 0.27
Herc4-201ENSMUST00000020258 1700123L14RikQ3V2K7 440 aa16.71■□□□□ 0.27
Herc4-201ENSMUST00000020258 Anks4bQ8K3X6 423 aa16.7■□□□□ 0.26
Herc4-201ENSMUST00000020258 Synj1Q8CHC4 1574 aa16.67■□□□□ 0.26
Herc4-201ENSMUST00000020258 CenpbP27790 599 aa16.65■□□□□ 0.26
Herc4-201ENSMUST00000020258 NclP09405 707 aaKnown RBP16.63■□□□□ 0.25
Herc4-201ENSMUST00000020258 Crybg2B7ZCC2 1516 aa16.59■□□□□ 0.25
Herc4-201ENSMUST00000020258 CftrP26361 1476 aa16.57■□□□□ 0.24
Herc4-201ENSMUST00000020258 Cep162Q6ZQ06 1403 aa16.47■□□□□ 0.23
Herc4-201ENSMUST00000020258 Rapgef2Q8CHG7 1496 aa16.45■□□□□ 0.22
Herc4-201ENSMUST00000020258 Eif5bQ05D44 1216 aaKnown RBP16.38■□□□□ 0.21
Herc4-201ENSMUST00000020258 SafbD3YXK2 937 aaKnown RBP16.38■□□□□ 0.21
Herc4-201ENSMUST00000020258 Setd5Q5XJV7 1441 aa16.37■□□□□ 0.21
Herc4-201ENSMUST00000020258 BlmO88700 1416 aa16.34■□□□□ 0.21
Herc4-201ENSMUST00000020258 Cc2d2aQ8CFW7 1633 aa16.32■□□□□ 0.2
Herc4-201ENSMUST00000020258 Hnrnpul2Q00PI9 745 aaKnown RBP16.31■□□□□ 0.2
Herc4-201ENSMUST00000020258 Npm1Q61937 292 aaKnown RBP16.3■□□□□ 0.2
Herc4-201ENSMUST00000020258 Chic2Q9D9G3 165 aa16.3■□□□□ 0.2
Herc4-201ENSMUST00000020258 Fmn1Q05860 1466 aa16.29■□□□□ 0.2
Herc4-201ENSMUST00000020258 Aplp2Q06335 707 aa16.29■□□□□ 0.2
Herc4-201ENSMUST00000020258 Kif15Q6P9L6 1387 aa16.26■□□□□ 0.19
Herc4-201ENSMUST00000020258 BicraF8VPZ9 1578 aa16.23■□□□□ 0.19
Herc4-201ENSMUST00000020258 Eea1Q8BL66 1411 aa16.21■□□□□ 0.19
Herc4-201ENSMUST00000020258 Tnnt3Q9QZ47 272 aa16.2■□□□□ 0.18
Herc4-201ENSMUST00000020258 Stra8P70278 393 aa16.19■□□□□ 0.18
Herc4-201ENSMUST00000020258 Hspa5P20029 655 aaKnown RBP16.18■□□□□ 0.18
Herc4-201ENSMUST00000020258 Cttnbp2B9EJA2 1648 aa16.17■□□□□ 0.18
Herc4-201ENSMUST00000020258 Zbtb7cQ8VCZ7 619 aa16.17■□□□□ 0.18
Herc4-201ENSMUST00000020258 Zbtb4Q5F293 982 aa16.15■□□□□ 0.18
Herc4-201ENSMUST00000020258 Fam71e1A1L3C1 212 aa16.14■□□□□ 0.17
Herc4-201ENSMUST00000020258 Ubl4bQ9CQ84 188 aa16.14■□□□□ 0.17
Herc4-201ENSMUST00000020258 Smarca4Q3TKT4 1613 aaKnown RBP16.13■□□□□ 0.17
Herc4-201ENSMUST00000020258 Sin3aQ60520 1274 aaKnown RBP16.11■□□□□ 0.17
Herc4-201ENSMUST00000020258 Top2bQ64511 1612 aa16.08■□□□□ 0.16
Herc4-201ENSMUST00000020258 Ttbk1Q6PCN3 1308 aa16.07■□□□□ 0.16
Herc4-201ENSMUST00000020258 Top2aQ01320 1528 aaKnown RBP16.06■□□□□ 0.16
Herc4-201ENSMUST00000020258 P3h3Q8CG70 732 aa16.05■□□□□ 0.16
Herc4-201ENSMUST00000020258 NrdcQ8BHG1 1161 aa16.04■□□□□ 0.16
Herc4-201ENSMUST00000020258 PtprkP35822 1457 aa16.03■□□□□ 0.16
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