RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Fam19a4Q7TPG5 135 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Wfdc15bQ9JHY4 80 aa13.1□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Tmem258P61166 79 aa13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Anapc1P53995 1944 aaKnown RBP13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Trbv16A0A0B4J1H3 115 aa13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 P01643 108 aa13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Hoxb4P10284 250 aa13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Obox8V9GWY9 217 aa13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Foxc1Q61572 553 aa13.09□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Arhgap21Q6DFV3 1944 aa13.08□□□□□ -0.31
Shroom3-204ENSMUST00000168878 Gm15093A2BI72 449 aa13.08□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15097E9QA14 449 aa13.08□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Heatr5aQ5PRF0 2038 aa13.08□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Ighv13-2A0A0A6YWN3 119 aa13.08□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Pglyrp1O88593 182 aa13.07□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Atp6v0e2Q91XE7 81 aa13.07□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Mrpl35Q9CQL6 188 aa13.07□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm17359A0A0G2JEB7 487 aa13.07□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Col5a3Q9JLI2 1739 aa13.07□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Prpf8Q99PV0 2335 aaKnown RBP13.07□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Col6a4A2AX52 2309 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15128A2ADW8 449 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Luzp4B1AV09 449 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15107B1B0X0 449 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15085Q62012 449 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 CadB2RQC6 2225 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 BlcapP62951 87 aa13.06□□□□□ -0.32
Shroom3-204ENSMUST00000168878 P01728 117 aa13.05□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Trav7-6A0A075B640 112 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 9130230L23RikQ8CC80 163 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Igkv4-74A0A0B4J1I3 119 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15127B1AVZ5 449 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15091B1AZM2 449 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gata1P17679 413 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm42674D3YUT9 64 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Rp1l1Q8CGM2 1859 aa13.04□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Ighv1-53A0A075B5W3 117 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Ighv2-6A0A075B6A7 116 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 P01748 117 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm4861Q8C5A4 106 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Ang3P97802 145 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 MifP34884 115 aaKnown RBP13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Ncor1Q60974 2453 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 AngP21570 145 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Prop1P97458 223 aa13.03□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Klk11Q9QYN3 276 aa13.02□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Gm15557A6PWY0 234 aa13.02□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Atp5eP56382 52 aa13.02□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Cox7a1P56392 80 aa13.02□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Odf3l1Q810P2 275 aa13.02□□□□□ -0.32
Shroom3-204ENSMUST00000168878 Trav11A0A0B4J1J9 114 aa13.02□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Plxnb1Q8CJH3 2119 aa13.02□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Trav13n-1A0A0G2JEU8 110 aa13.01□□□□□ -0.33
Shroom3-204ENSMUST00000168878 AvpP35455 168 aa13.01□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Ighv2-7A0A075B5Q8 116 aa13.01□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Igkv1-122A0A140T8M9 119 aa13.01□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Ndufa4l2Q4FZG9 87 aa13□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Crybg1A0A0G2JG52 2065 aa13□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Acyp1P56376 99 aa13□□□□□ -0.33
Shroom3-204ENSMUST00000168878 1700010B08RikQ9DAI7 102 aa13□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Col8a2P25318 699 aa13□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Cfap126Q6P8X9 189 aa13□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Nsun4C4P6S0 806 aaKnown RBP12.99□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Snai3Q9QY31 287 aa12.99□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Sec16aA2AIX1 2377 aa12.99□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Gm9958Q8C9U4 106 aa12.99□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Trav13d-1A0A075B606 110 aa12.99□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Zfand3Q497H0 227 aa12.99□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Tm2d2Q8R0I4 213 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 9430069I07RikQ9CX21 111 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 CenpeQ6RT24 2474 aaKnown RBP12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Prh1P05142 261 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Q9D131 166 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 PrcdQ00LT2 53 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Map6d1Q14BB9 191 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Dopey2Q3UHQ6 2295 aa12.98□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Gm10518F6UQQ9 182 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Spink8Q09TK9 105 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Arfgef3Q3UGY8 2170 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 4930546C10RikE9Q4Y3 121 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Ucn2Q99ML8 113 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Cryba4Q9JJV0 196 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 1810032O08RikE9PZV8 113 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Ypel4Q65Z93 127 aa12.97□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Col24a1Q30D77 1733 aa12.96□□□□□ -0.33
Shroom3-204ENSMUST00000168878 PtprsB0V2N1 1907 aa12.96□□□□□ -0.33
Shroom3-204ENSMUST00000168878 CrygcQ61597 174 aa12.96□□□□□ -0.33
Shroom3-204ENSMUST00000168878 PpdpfQ9CR37 115 aa12.96□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Gata3P23772 443 aa12.96□□□□□ -0.33
Shroom3-204ENSMUST00000168878 Trav13d-4A0A0G2JFX3 110 aa12.96□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Ube2bP63147 152 aa12.96□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Dennd4cA6H8H2 1906 aa12.96□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Atp5g3P56384 141 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Atp5g1Q9CR84 136 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Ncoa6Q9JL19 2067 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Zmat4Q8BZ94 229 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Gm17472A0A075B683 117 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Ighv1-11A0A0A6YWI9 117 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Gvin1Q80SU7 2427 aa12.95□□□□□ -0.34
Shroom3-204ENSMUST00000168878 Col4a6B1AVK5 1691 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms