RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Smim1P0C8K7 78 aa17.75■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Ss18Q62280 418 aa17.75■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Bsph2Q0Q236 131 aa17.75■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Ucn2Q99ML8 113 aa17.75■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Ighv1-85A0A075B5Y6 117 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm29289A0A087WPY7 166 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm4064A0A087WR82 380 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm10352B2RWR6 380 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Krtap27-1E9PX37 202 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm21693J3QK27 380 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Rbmy1a1O35698 380 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 P01753 117 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Cks1brtQ3UNC9 96 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Htr1dQ61224 374 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Synj2bpQ9D6K5 145 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Q9D727 114 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Fam240aJ3QNP9 97 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Tcrg-C3L7N479 172 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 P03985 172 aa17.74■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm29666A0A087WQ99 126 aa17.73■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Ccl19O70460 108 aa17.73■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Mllt11P97783 90 aa17.73■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Ly86O88188 162 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 4930596D02RikQ3V0H9 216 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm8439G3UWA7 96 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Reg3gO09049 174 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Vamp8O70404 101 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Rpl39P62892 51 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Pradc1Q9D9N8 188 aa17.72■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Defa34D3Z0J0 93 aa17.71■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm26727M0QWT1 121 aa17.71■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Spink10Q8CAC8 162 aa17.71■□□□□ 0.43
Ubp1-203ENSMUST00000116492 Gm5089A1L3C8 106 aa17.71■□□□□ 0.42
Ubp1-203ENSMUST00000116492 P01802 115 aa17.71■□□□□ 0.42
Ubp1-203ENSMUST00000116492 P06329 120 aa17.71■□□□□ 0.42
Ubp1-203ENSMUST00000116492 S100a8P27005 89 aa17.71■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Rnf183Q8QZS5 190 aa17.71■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Cox7cP17665 63 aa17.7■□□□□ 0.42
Ubp1-203ENSMUST00000116492 GalmQ8K157 342 aa17.69■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Trbv30A0A0B4J1P1 111 aa17.69■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Gm7489Q3UT34 171 aa17.69■□□□□ 0.42
Ubp1-203ENSMUST00000116492 LrbaQ9ESE1 2856 aa17.69■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Gm10295Q8CCF3 114 aa17.68■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Mcrip2Q9CQB2 160 aaKnown RBP17.68■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Timm17aQ9Z0V8 171 aa17.68■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Celsr2Q9R0M0 2920 aa17.68■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Gm26602M0QWA4 95 aa17.68■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Klk1b4P00757 256 aa17.68■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Trav8-1A0A075B641 109 aa17.67■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Defa13P50711 93 aa17.67■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Spag11Q8K4N2 71 aa17.67■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Tm4sf20Q9CQY8 226 aa17.67■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Plac1Q9JI83 173 aa17.67■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Muc4Q8JZM8 3443 aa17.67■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Smr3aQ61900 147 aa17.66■□□□□ 0.42
Ubp1-203ENSMUST00000116492 F11rO88792 300 aa17.66■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Mtatp8P03930 67 aa17.66■□□□□ 0.42
Ubp1-203ENSMUST00000116492 MturnQ8CGA4 131 aa17.66■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Gm10490F6VBM2 120 aa17.65■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Hectd1Q69ZR2 2618 aaKnown RBP17.65■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Q5BN45 167 aa17.65■□□□□ 0.42
Ubp1-203ENSMUST00000116492 Igkv2-137A0A0B4J1H6 120 aa17.64■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Igkv4-68A0A0B4J1I7 117 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 TtrP07309 147 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Defb45Q3V490 66 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Tep1P97499 2629 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Ighv1-5A0A0A6YWG2 117 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm1553Q66VB7 94 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Pxt1Q8K459 51 aa17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Usp9xP70398 2559 aaKnown RBP17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gcn1E9PVA8 2671 aaKnown RBP17.63■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm44965A0A0N4SVR3 59 aa17.62■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Rnase1P00683 149 aa17.62■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm14137Q8CE97 175 aa17.62■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Spata25Q9DA57 226 aa17.62■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm2564F6Z9S8 108 aa17.61■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Ifi27l2aQ8R412 90 aa17.61■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Q9D8Q6 235 aa17.61■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Higd1aQ9JLR9 95 aa17.61■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Trav4n-4A0A075B615 110 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm26661M0QWV4 156 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 FcorP0DJI6 106 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Iglc1A0A0G2JE99 106 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm10509O88255 85 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 P01843 105 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Ifitm1Q9D103 106 aa17.6■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Muc2Q80Z19 2680 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Nat8b-psE0CYC6 232 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Gm3443F7CCV5 94 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 P01786 117 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 SbpP15501 199 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Cox17P56394 63 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Atxn7l1Q9CZ05 146 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 AY761184Q9D848 116 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Foxi2Q3I5G5 311 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 4930470P17RikQ9D542 155 aa17.59■□□□□ 0.41
Ubp1-203ENSMUST00000116492 Tmem97Q8VD00 176 aa17.58■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Dppa2Q9CWH0 301 aa17.58■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Dpm2Q9Z324 84 aa17.58■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Defb2P82020 71 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 149 ms