RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Crip1P63254 77 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Plxna2P70207 1894 aa10.79□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Trav13n-2A0A0G2JF93 110 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 IgipA0A1B0GR74 53 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Q99M08 65 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Trav13-2A0A075B649 110 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 FancmQ8BGE5 2021 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm20708H3BKF4 155 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Ramp1Q9WTJ5 148 aa10.78□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Gm8251F6VUT6 1994 aa10.77□□□□□ -0.68
Col3a1-201ENSMUST00000087883 PrcdQ00LT2 53 aa10.77□□□□□ -0.68
Col3a1-201ENSMUST00000087883 Cfap46E9Q2C0 2641 aa10.77□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Klk12B2RVZ0 247 aa10.77□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Vpreb2P13373 142 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Acyp1P56376 99 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Trav13-1A0A075B644 110 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Hoxb4P10284 250 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Atp5g1Q9CR84 136 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Zfp407G3UVV3 2246 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Obsl1D3YYU8 1804 aaKnown RBP10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 BC107364E9Q5A2 140 aa10.76□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Armcx4E9PWM3 2356 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Igkv1-88A0A140T8N1 120 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 B230359F08RikA0A0B4J1K3 109 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 P01643 108 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Mlst8Q9DCJ1 326 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 1700010B08RikQ9DAI7 102 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Dazap2Q9DCP9 168 aa10.75□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Trbv16A0A0B4J1H3 115 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 BlcapP62951 87 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Fam222aQ6PGH4 453 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Tmem131O70472 1877 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Trav13-4-dv7A0A075B6C2 110 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Igf1P05017 153 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Zc2hc1bQ9D534 172 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Nlrc5C3VPR6 1915 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Iglv1A0A075B663 117 aa10.74□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Fam208bQ5DTT3 2382 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Ighv1-53A0A075B5W3 117 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 P01748 117 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Gm44965A0A0N4SVR3 59 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Gm3618D3Z4P5 127 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Ppp1r32Q148A4 427 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Ormdl1Q921I0 153 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 P04943 107 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 P04944 107 aa10.73□□□□□ -0.69
Col3a1-201ENSMUST00000087883 PpdpfQ9CR37 115 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Igkv8-18A0A0B4J1J3 123 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Gm15091B1AZM2 449 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Gm10542F6XDR3 90 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Tmem254aP0DN89 123 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Tmem254bP0DN90 123 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Tmem254cP0DN91 123 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 AcacaQ5SWU9 2345 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Cacna1gQ5SUF7 2381 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Wfdc11A2A5H7 82 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Frem1Q684R7 2191 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Ahctf1Q8CJF7 2243 aaKnown RBP10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 P01674 108 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 9430069I07RikQ9CX21 111 aa10.72□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Ighv2-7A0A075B5Q8 116 aa10.71□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Fgf6P21658 208 aa10.71□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Cox7b2Q9D2H1 82 aa10.71□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Q9D131 166 aa10.71□□□□□ -0.69
Col3a1-201ENSMUST00000087883 Ighv8-12A0A0G2JDE1 119 aa10.71□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Atp5g3P56384 141 aa10.71□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Camk2n2Q78WH7 79 aa10.71□□□□□ -0.7
Col3a1-201ENSMUST00000087883 MsmpB1AWI6 139 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Tmem213Q08EA8 116 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 CstadQ9D245 104 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Kif26aQ52KG5 1881 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm21060J3KMU4 56 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Myo7bQ99MZ6 2113 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Nckap5E9QAE1 1909 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Snai3Q9QY31 287 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm15217A2CG07 155 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 1810032O08RikE9PZV8 113 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Prop1P97458 223 aa10.7□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Col8a2P25318 699 aa10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Igkv3-5A0A140T8M6 119 aa10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 P01658 132 aa10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Tmem223Q9CQE2 199 aaKnown RBP10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Rpl39lQ9CQD0 51 aa10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Triap1Q9D8Z2 76 aa10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Med12A2AGH6 2190 aa10.69□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm17577J3QNF7 156 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Odf3l1Q810P2 275 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm5468Q8C3D3 155 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Klk5Q9D140 293 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 SptssbQ925E8 76 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Q9DAQ5 155 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Naa38Q9D2U5 125 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Obox8V9GWY9 217 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Ighv2-6A0A075B6A7 116 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm37389A0A0A6YW05 95 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Eml5Q8BQM8 1977 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Ighv3-1A0A075B5S6 116 aa10.68□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm28539A0A087WSL9 92 aa10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm6034E9Q101 117 aa10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Ebi3O35228 228 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms