RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 PkdrejQ9Z0T6 2126 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 P0C913 63 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Arhgef17Q80U35 2057 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Cacna1hO88427 2365 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Ighv1-11A0A0A6YWI9 117 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Igkv3-5A0A140T8M6 119 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 4930546C10RikE9Q4Y3 121 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Wfdc9Q3UW41 83 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Plxnd1Q3UH93 1925 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Egr2P08152 470 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Pcnx2Q5DU28 2122 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 1110002E22RikE0CYV9 1786 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Odf3l1Q810P2 275 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Cep250Q60952 2414 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Igkv8-18A0A0B4J1J3 123 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Gm9513B3GLJ6 99 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 NpyP57774 97 aa5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Fhl1P97447 280 aaKnown RBP5.03□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Wfdc15bQ9JHY4 80 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Igkv8-26A0A075B5N5 123 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 IgipA0A1B0GR74 53 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 PrcdQ00LT2 53 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Arfgef3Q3UGY8 2170 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm15557A6PWY0 234 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 ColqO35348 457 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm10735Q3US96 136 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Zfand3Q497H0 227 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Defb29Q8BGW9 78 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Mrpl35Q9CQL6 188 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ighv13-2A0A0A6YWN3 119 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm17324Q8C6J8 137 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Fer1l4A3KGK3 1992 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 NpbQ8K4P1 119 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Cryba4Q9JJV0 196 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 RlfA2A7F4 1918 aa5.02□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Vwa8Q8CC88 1905 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Vpreb2P13373 142 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gata1P17679 413 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Dock9Q8BIK4 2055 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ighv1-61P01749 117 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Fer1l5P0DM40 2038 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Exph5Q0VAV2 1960 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Pla2g2aP31482 146 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Defb47Q30KN1 79 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm9958Q8C9U4 106 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Snai3Q9QY31 287 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Foxc1Q61572 553 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Trav9n-2A0A0G2JDP3 113 aa5.01□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm20730A0A075B5J6 119 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm10251J3QPM5 127 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 BikO70337 150 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 AW146154Q3TPQ7 468 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ndufa4l2Q4FZG9 87 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm2916Q9D9B9 127 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 P01674 108 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ormdl1Q921I0 153 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 C920008G01RikA0A0B4J1N1 112 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm20708H3BKF4 155 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Armcx4E9PWM3 2356 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm6034E9Q101 117 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 MylkQ6PDN3 1941 aaKnown RBP5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Trav9d-3A0A075B695 113 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Cacna1eQ61290 2272 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Shank1D3YZU1 2167 aa5□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ighv2-7A0A075B5Q8 116 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm17472A0A075B683 117 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 MsmpB1AWI6 139 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Rnase1P00683 149 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm10553J3QPF1 123 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Rpl18aP62717 176 aaKnown RBP4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm37389A0A0A6YW05 95 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Camk2n2Q78WH7 79 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Znf672Q99LH4 468 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Pla2g2dQ9WVF6 144 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 SptssbQ925E8 76 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm7257D3YX25 99 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm10518F6UQQ9 182 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm17577J3QNF7 156 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Tmem254aP0DN89 123 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Tmem254bP0DN90 123 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Tmem254cP0DN91 123 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Prop1P97458 223 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Fam19a4Q7TPG5 135 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ucn2Q99ML8 113 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Rp1P56716 2095 aa4.99□□□□□ -1.61
Scn1a-201ENSMUST00000077489 PtprdQ64487 1912 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Pcdh15Q99PJ1 1943 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Fam222aQ6PGH4 453 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ube2aQ9Z255 152 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Eml5Q8BQM8 1977 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Trav9n-4A0A075B631 113 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Cox7a1P56392 80 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Psmb11Q8BG41 302 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 1700012A03RikQ9DAF1 130 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Tax1bp3Q9DBG9 124 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 1810032O08RikE9PZV8 113 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm5629P06327 117 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Spag11Q8K4N2 71 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Map6d1Q14BB9 191 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Timm17bQ9Z0V7 172 aa4.98□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 111.3 ms