RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm10352B2RWR6 380 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Krtap27-1E9PX37 202 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm5819E9PZ96 154 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm21693J3QK27 380 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Rbmy1a1O35698 380 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 P06329 120 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Csn3P06796 181 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Hoxd3P09027 433 aa9.37□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Ptpn13Q64512 2453 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Sorl1O88307 2215 aaKnown RBP9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Ighv1-85A0A075B5Y6 117 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Ccl19O70460 108 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Rpl39P62892 51 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Tep1P97499 2629 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm26602M0QWA4 95 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 ColqO35348 457 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 P01802 115 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Tmem170bP86050 132 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Runx1Q03347 451 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Defb45Q3V490 66 aa9.36□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Tcrg-C3L7N479 172 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 P01753 117 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 P03985 172 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Cox7cP17665 63 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Bsph2Q0Q236 131 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 MturnQ8CGA4 131 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Q9D727 114 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Pradc1Q9D9N8 188 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Smr3aQ61900 147 aa9.35□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Htr1dQ61224 374 aa9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Ucn2Q99ML8 113 aa9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Ank2Q8C8R3 3898 aa9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Mtatp8P03930 67 aa9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm10295Q8CCF3 114 aa9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Synj2bpQ9D6K5 145 aa9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gcn1E9PVA8 2671 aaKnown RBP9.34□□□□□ -0.91
Rnf4-201ENSMUST00000030992 Gm8439G3UWA7 96 aa9.34□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Mcrip2Q9CQB2 160 aaKnown RBP9.34□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm29666A0A087WQ99 126 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm14137Q8CE97 175 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Muc2Q80Z19 2680 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 BsnO88737 3942 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Hectd1Q69ZR2 2618 aaKnown RBP9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm44965A0A0N4SVR3 59 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Vamp8O70404 101 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Mllt11P97783 90 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 4930596D02RikQ3V0H9 216 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Spink10Q8CAC8 162 aa9.33□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Trav8-1A0A075B641 109 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Igkv4-68A0A0B4J1I7 117 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm10490F6VBM2 120 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Cks1brtQ3UNC9 96 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Spag11Q8K4N2 71 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Tm4sf20Q9CQY8 226 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Timm17aQ9Z0V8 171 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Igkv2-137A0A0B4J1H6 120 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Defa34D3Z0J0 93 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Fam240aJ3QNP9 97 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Reg3gO09049 174 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 F11rO88792 300 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Rnf183Q8QZS5 190 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 AamdcQ8R0P4 122 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Q9D8Q6 235 aa9.32□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Usp9xP70398 2559 aaKnown RBP9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Col7a1Q63870 2944 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Ighv1-5A0A0A6YWG2 117 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm5089A1L3C8 106 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 SbpP15501 199 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 AngP21570 145 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Plac1Q9JI83 173 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Iglc1A0A0G2JE99 106 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Ly86O88188 162 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 P01843 105 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 FcorP0DJI6 106 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Defa13P50711 93 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Pxt1Q8K459 51 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 CubnQ9JLB4 3623 aa9.31□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm2564F6Z9S8 108 aa9.3□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Klk1b4P00757 256 aa9.3□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm1553Q66VB7 94 aa9.3□□□□□ -0.92
Rnf4-201ENSMUST00000030992 S100a8P27005 89 aa9.3□□□□□ -0.92
Rnf4-201ENSMUST00000030992 SrarpQ3ULG3 163 aa9.3□□□□□ -0.92
Rnf4-201ENSMUST00000030992 PerpQ9JK95 193 aa9.3□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm26661M0QWV4 156 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm10509O88255 85 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Trbv30A0A0B4J1P1 111 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm42674D3YUT9 64 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 B230217C12RikE9Q3Z1 139 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Gm3443F7CCV5 94 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Foxi2Q3I5G5 311 aa9.29□□□□□ -0.92
Rnf4-201ENSMUST00000030992 GalmQ8K157 342 aa9.28□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Tmem97Q8VD00 176 aa9.28□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Trav4n-4A0A075B615 110 aa9.27□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Pdzd2E9Q1M1 2796 aa9.27□□□□□ -0.92
Rnf4-201ENSMUST00000030992 A530064D06RikQ8BNV8 229 aa9.27□□□□□ -0.92
Rnf4-201ENSMUST00000030992 Nat8b-psE0CYC6 232 aa9.27□□□□□ -0.93
Rnf4-201ENSMUST00000030992 Rnase1P00683 149 aa9.27□□□□□ -0.93
Rnf4-201ENSMUST00000030992 TtrP07309 147 aa9.27□□□□□ -0.93
Rnf4-201ENSMUST00000030992 Rnf152Q8BG47 203 aa9.27□□□□□ -0.93
Rnf4-201ENSMUST00000030992 4930470P17RikQ9D542 155 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms