RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Lyrm9Q3UN90 78 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Smim20D3Z7Q2 69 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Nop10Q9CQS2 64 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Ccl24Q9JKC0 119 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Ep300B2RWS6 2412 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Trav11A0A0B4J1J9 114 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Dazap2Q9DCP9 168 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Prp2P05143 317 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Acyp1P56376 99 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Tmem213Q08EA8 116 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Nbl1Q61477 178 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Plxnb1Q8CJH3 2119 aa11.76□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm42674D3YUT9 64 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Crybg1A0A0G2JG52 2065 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Ypel4Q65Z93 127 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Mrpl35Q9CQL6 188 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Trav9n-2A0A0G2JDP3 113 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 P01728 117 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 UrahQ9CRB3 118 aa11.75□□□□□ -0.53
Col2a1-201ENSMUST00000023123 PpdpfQ9CR37 115 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 CstadQ9D245 104 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Trav9d-3A0A075B695 113 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 OdaphJ3QNT8 126 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Trav9-2A0A075B647 113 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Trav9-4A0A0B4J1K2 113 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm10553J3QPF1 123 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Q99M08 65 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Luzp4B1AV09 449 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm15127B1AVZ5 449 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm15107B1B0X0 449 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm15085Q62012 449 aa11.74□□□□□ -0.53
Col2a1-201ENSMUST00000023123 AngP21570 145 aa11.73□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Ighv3-1A0A075B5S6 116 aa11.73□□□□□ -0.53
Col2a1-201ENSMUST00000023123 MsmpB1AWI6 139 aa11.73□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Spink8Q09TK9 105 aa11.73□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Erdr1J3QMM0 206 aa11.73□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm9949Q8C9F4 104 aa11.73□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm21994F6T2D2 329 aa11.72□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Gm6034E9Q101 117 aa11.72□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Brk1Q91VR8 75 aa11.72□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Ndufs7Q9DC70 224 aa11.72□□□□□ -0.53
Col2a1-201ENSMUST00000023123 1700010B08RikQ9DAI7 102 aa11.72□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Ndufa4l2Q4FZG9 87 aa11.71□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Mrpl52Q9D0Y8 121 aa11.71□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Atp5g3P56384 141 aa11.71□□□□□ -0.53
Col2a1-201ENSMUST00000023123 Atp5g1Q9CR84 136 aa11.71□□□□□ -0.53
Col2a1-201ENSMUST00000023123 P01748 117 aa11.71□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Gm15128A2ADW8 449 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 A230072I06RikQ3UUJ8 172 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Zmat4Q8BZ94 229 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Snai3Q9QY31 287 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 SrcapA0A087WQ44 3271 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 MifP34884 115 aaKnown RBP11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Sdk2Q6V4S5 2176 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Igkv4-74A0A0B4J1I3 119 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 BC107364E9Q5A2 140 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ccl21aP84444 133 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ccl21bP86792 133 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ccl21cP86793 133 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Med13lQ6JPI3 2207 aa11.7□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Pglyrp1O88593 182 aa11.69□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Wfdc15bQ9JHY4 80 aa11.69□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Gm15091B1AZM2 449 aa11.69□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Trav13n-1A0A0G2JEU8 110 aa11.69□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Gata3P23772 443 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Cfap126Q6P8X9 189 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Q9D131 166 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Odf3l1Q810P2 275 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 MgamB5THE2 1827 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 CtrlQ9ER05 264 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Arid1bE9Q4N7 2244 aa11.68□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ighv1-53A0A075B5W3 117 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ighv13-2A0A0A6YWN3 119 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Tmem254aP0DN89 123 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Tmem254bP0DN90 123 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Tmem254cP0DN91 123 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Igkv1-122A0A140T8M9 119 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 P01643 108 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 9430069I07RikQ9CX21 111 aa11.67□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Arhgap21Q6DFV3 1944 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 F5O88783 2183 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Anapc1P53995 1944 aaKnown RBP11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Prr12E9PYL2 2035 aaKnown RBP11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Trav13d-1A0A075B606 110 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Gm44965A0A0N4SVR3 59 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 BlcapP62951 87 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Rbx1P62878 108 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ucn2Q99ML8 113 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Hoxb4P10284 250 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Fam110dQ80X91 271 aa11.66□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ang3P97802 145 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Gm4861Q8C5A4 106 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ighv1-11A0A0A6YWI9 117 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Gm28539A0A087WSL9 92 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Cox7a1P56392 80 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Ormdl1Q921I0 153 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Triap1Q9D8Z2 76 aa11.65□□□□□ -0.54
Col2a1-201ENSMUST00000023123 Wnk1P83741 2377 aa11.65□□□□□ -0.55
Col2a1-201ENSMUST00000023123 CrygcQ61597 174 aa11.65□□□□□ -0.55
Col2a1-201ENSMUST00000023123 9130230L23RikQ8CC80 163 aa11.65□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms