RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Dock10Q8BZN6 2150 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Trav13d-4A0A0G2JFX3 110 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm44973A0A140LJJ1 189 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01788 123 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm9961Q8BNV2 113 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 EnhoQ8K1D8 76 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Trip11E9Q512 1976 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01787 123 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Prp2P05143 317 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Fhl4Q8CDC8 279 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ccl24Q9JKC0 119 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Nrxn2E9Q7X7 1710 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Igkv1-35A0A0G2JDE5 120 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01792 123 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Cd24P24807 76 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 ElnP54320 860 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01660 111 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01750 117 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ube2d1P61080 147 aaKnown RBP6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Col4a5Q63ZW6 1691 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Igkv8-28A0A0G2JE47 121 aa6□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ltbp2O08999 1813 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ighv5-8A0A075B676 92 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Mrpl35Q9CQL6 188 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm12216A0A1W2P827 62 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Wbp1P97764 304 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 9430015G10RikA2ASP7 199 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 7420426K07RikQ3UX66 186 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ighv1-11A0A0A6YWI9 117 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Trav13n-1A0A0G2JEU8 110 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm4744D3Z3S5 154 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01791 123 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Lyg1Q9D7Q0 197 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Cacna1bO55017 2327 aa5.99□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ighv1-4A0A075B5T4 117 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ighv1-77A0A0G2JGS9 117 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm13090A2A899 111 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm15217A2CG07 155 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P01753 117 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm10192Q3V0S1 108 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 A130051J06RikQ8CAU1 227 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm20878L7N244 103 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Loxl1P97873 607 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Fam19a4Q7TPG5 135 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Fam216bQ8CC14 138 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ufsp1Q9CZP0 217 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Trav9n-2A0A0G2JDP3 113 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 LhbO09108 141 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ighv1-61P01749 117 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Gm9881Q8BR56 211 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Trav13-1A0A075B644 110 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 C1qcQ02105 246 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Vopp1Q8R1C3 172 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Cacna1aP97445 2368 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 UrahQ9CRB3 118 aa5.98□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Mp68P56379 58 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Grem1O70326 184 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Ighv10-3A0A075B5T6 119 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Plac8l1Q08EJ0 177 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Plxnb2B2RXS4 1842 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Inafm1E9PV59 130 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Cdpf1Q8R3A2 119 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Zfc3h1B2RT41 1992 aaKnown RBP5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Dopey2Q3UHQ6 2295 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 P18527 97 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Mbd6Q3TY92 1003 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Mtcl1Q3UHU5 1945 aa5.97□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Mia3Q8BI84 1930 aa5.96□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Nxph4G3X9N5 304 aa5.96□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Spag11Q8K4N2 71 aa5.96□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Defb3Q9WTL0 63 aa5.96□□□□□ -1.45
Pcdh9-204ENSMUST00000193901 Cfc1P97766 202 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 NrapQ80XB4 1728 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ighv1-12A0A0A6YXJ9 117 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ypel4Q65Z93 127 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Tmem210Q9D2F0 147 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Esm1Q9QYY7 184 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Abca7Q91V24 2159 aa5.96□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Wfdc9Q3UW41 83 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 SisF8VQM5 1818 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Scn10aQ6QIY3 1958 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ighv1-82A0A0G2JEU7 117 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ube2d3P61079 147 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 PifoQ9D9W1 207 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Fgf23Q9EPC2 251 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Frmpd3A0A140LIW3 1774 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 1700084M14RikB1AT01 78 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 A830031A19RikQ8BNT5 113 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Wdr38Q9D994 303 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Znf106O88466 1888 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 TicrrQ8BQ33 1889 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gp9O88186 177 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Prok1Q14A28 105 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Msrb3Q8BU85 253 aa5.95□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Togaram1Q6A070 1776 aaKnown RBP5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Prh1P05142 261 aa5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Q8C708 225 aa5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Gm10647E9Q8X0 124 aa5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Akap6E9Q9K8 2307 aa5.94□□□□□ -1.46
Pcdh9-204ENSMUST00000193901 Ighv3-6P18531 116 aa5.94□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms