RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Znf318Q99PP2 2237 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Trav12-3A0A075B648 115 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm12216A0A1W2P827 62 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Zcchc24B2RVL6 241 aaKnown RBP4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm10518F6UQQ9 182 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 P01792 123 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 RetnlbQ99P86 105 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Stpg1Q9D2F5 341 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Wfdc2Q9DAU7 174 aa4.54□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 IappP12968 93 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm17472A0A075B683 117 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 A0A1L1SR50 188 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm12355A2A4X6 163 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Srsf3P84104 164 aaKnown RBP4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ang5Q5GAN1 145 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ighv3-8A0A075B5T0 131 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ighv5-9-1A0A0A6YVS4 126 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Ighv1-9A0A0A6YW37 117 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Igkv8-21A0A140T8P7 120 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Gm10401E9Q3K6 71 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Rpl18aP62717 176 aaKnown RBP4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Wfdc18P62810 74 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Cd164Q9R0L9 197 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Igkv4-92A0A0B4J1I2 117 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Igkv5-37A0A140T8N4 115 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Iglc3P01845 104 aa4.53□□□□□ -1.68
Pcdh9-202ENSMUST00000192221 Trav9d-3A0A075B695 113 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccdc179J3QM76 67 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P06320 134 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 F8Q06194 2319 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Sdhaf1Q3U276 118 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Apoc4Q61268 124 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ralgapa1Q6GYP7 2035 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Anapc1P53995 1944 aaKnown RBP4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv1-81A0A075B5Y4 117 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Trbv13-3A0A0B4J1H2 113 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm15217A2CG07 155 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tcl1b2P56841 117 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tmem14cQ9CQN6 114 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Akap6E9Q9K8 2307 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 9930021J03RikH3BKP8 2027 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cacna1bO55017 2327 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Lrcol1Q3URS3 161 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Lypd6Q8BPP5 171 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm4861Q8C5A4 106 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 4933414I15RikQ9D4D5 133 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv1-31A0A0A6YWK5 117 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm20499D3Z4G5 72 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccl21aP84444 133 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccl21bP86792 133 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ccl21cP86793 133 aa4.52□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Dock10Q8BZN6 2150 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 6430628N08RikA0A0U1RQ45 177 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm9887F6RFI0 207 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm9970F6ZED4 185 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv3-6P18531 116 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 CrygcQ61597 174 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 UqcrqQ9CQ69 82 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Pla2g2cP48076 150 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 A130051J06RikQ8CAU1 227 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Dkk4Q8VEJ3 221 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Lmo1Q924W9 156 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gtsf1Q9DAN6 167 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Prss22Q9ER10 306 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tfpi2O35536 230 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv1-61P01749 117 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Rspo1Q9Z132 265 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Atg2bQ80XK6 2075 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P01756 117 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P01757 117 aa4.51□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 PcntP48725 2898 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm5129F6YHA9 99 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Wt1P22561 449 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Defb47Q30KN1 79 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm10912Q3UXH0 145 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Fblim1Q71FD7 375 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cyyr1Q8VIH7 165 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 NmbQ9CR53 121 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 1700010B08RikQ9DAI7 102 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tcl1b3P56842 122 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm27027S4R1M6 97 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 NbeaQ9EPN1 2936 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm37388A0A0A6YY46 143 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cfc1P97766 202 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Coa6Q8BGD8 79 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv1-7A0A075B5T7 117 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm5878E9PUB3 99 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 C730034F03RikQ8BGL5 111 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Tctex1d4Q8CDY7 219 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Rchy1Q9CR50 261 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Cacna1hO88427 2365 aa4.5□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Iglv1A0A075B663 117 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Iglv3A0A0B4J1K5 122 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Iglc1A0A0G2JE99 106 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Gm42674D3YUT9 64 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 P01843 105 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Fam19a5Q91WE9 132 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Dock11A2AF47 2073 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Ighv8-2A0A0A6YW58 119 aa4.49□□□□□ -1.69
Pcdh9-202ENSMUST00000192221 Igkv3-4A0A140T8Q4 119 aa4.49□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms