RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mbd3l2Q3UXB0 228 aa15.46■□□□□ 0.07
Ccdc88a-202ENSMUST00000109477 Vmn1r216Q8R257 298 aa15.46■□□□□ 0.07
Ccdc88a-202ENSMUST00000109477 Ifi27l2aQ8R412 90 aa15.46■□□□□ 0.07
Ccdc88a-202ENSMUST00000109477 Leprotl1Q9CQ74 131 aa15.46■□□□□ 0.07
Ccdc88a-202ENSMUST00000109477 Gm42420A0A0J9YUQ2 99 aa15.46■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Prr3Q811B5 190 aaKnown RBP15.46■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Defb42Q8BVB5 75 aa15.46■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Fam103a1Q9CQY2 119 aaKnown RBP15.46■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm765B2RVL9 189 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Defa34D3Z0J0 93 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm20499D3Z4G5 72 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Defa37K9J724 93 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 SbpP15501 199 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Defa5P28312 93 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Q24JP4 165 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 MycbQ6P8Z1 170 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 RnasekQ8K3C0 98 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gpx7Q99LJ6 186 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Tppp3Q9CRB6 176 aaKnown RBP15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 CrygfQ9CXV3 174 aa15.45■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Rpl35aO55142 110 aa15.44■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Q9D131 166 aa15.44■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Crip2Q9DCT8 208 aaKnown RBP15.44■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Tnfrsf23Q9ER63 176 aa15.44■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm5157A0A087WRH8 301 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Igkv4-68A0A0B4J1I7 117 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Scgb1b24B1B0N6 92 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 TbpP29037 316 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Vamp3P63024 103 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm10842Q3U587 122 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 EpcamQ99JW5 315 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Trbv16A0A0B4J1H3 115 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm7138L7N2C3 230 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 C1qcQ02105 246 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Tnfsf18Q7TS55 173 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Olfr1195Q8VG21 308 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 8030423J24RikQ9CX45 142 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm3238W4VSP7 230 aa15.43■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Ighv1-66A0A075B5X5 117 aa15.42■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Olfr313Q5NC55 308 aa15.42■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Ctxnd2A0A1B0GQX3 59 aa15.41■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Khdc1cQ4KL78 166 aa15.41■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 RfxapQ8VCG9 231 aa15.41■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Foxi1Q922I5 372 aa15.41■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Mien1Q9CQ86 115 aa15.41■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 TnxbO35452 4006 aa15.41■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 1500011B03RikQ3TTH7 73 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 PdpnQ62011 172 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Iah1Q9DB29 249 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Mrpl32Q9DCI9 187 aaKnown RBP15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Foxi3E0CZH3 425 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Tcf21O35437 179 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 9130213A22RikQ3V3T2 120 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Ndufv3Q8BK30 104 aaKnown RBP15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Fam241bQ9D882 120 aa15.4■□□□□ 0.06
Ccdc88a-202ENSMUST00000109477 Gm7137J3QMW1 236 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Gm5426J3QNM7 103 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Mrps12O35680 139 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Fabp4P04117 132 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Egr2P08152 470 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 H2-DMb1P35737 261 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Spag11Q8K4N2 71 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Mrpl35Q9CQL6 188 aa15.39■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Trav14n-2A0A0G2JDF5 121 aa15.38■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Gm45623A0A1B0GSF6 103 aa15.38■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Gm10490F6VBM2 120 aa15.38■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Gm815Q3UWS2 115 aa15.38■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Csn3P06796 181 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Map1lc3aQ91VR7 121 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 PpbpQ9EQI5 113 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Nudt3Q9JI46 168 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 A730046J19RikA0A1B0GSN8 89 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 P01738 130 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Q99M08 65 aa15.37■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Gm17732E9Q5I2 61 aa15.36■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 H2al1nQ497L1 109 aa15.36■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Plpp2Q9DAX2 276 aa15.36■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Krtap27-1E9PX37 202 aa15.35■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 1810062G17RikG3X8Y2 129 aa15.35■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 CrygdP04342 174 aa15.35■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 CrygeQ03740 174 aa15.35■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Zcwpw2Q08EN7 125 aa15.35■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Defa24Q5G865 93 aa15.35■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Mmp23O88676 391 aa15.34■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Olfr1262Q8VGN2 304 aa15.34■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Q9D8Q6 235 aa15.34■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Emp2O88662 172 aa15.34■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 P06334 169 aa15.34■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Trav7d-3Q5R1I1 112 aa15.34■□□□□ 0.05
Ccdc88a-202ENSMUST00000109477 Pglyrp1O88593 182 aa15.33■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Fxyd5P97808 178 aa15.33■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Gm6040Q4QY32 63 aa15.33■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Tctex1d2Q9CQ66 144 aa15.33■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Lamtor2Q9JHS3 125 aa15.33■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Trav16d-dv11A0A075B617 117 aa15.31■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 B230217C12RikE9Q3Z1 139 aa15.31■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Rab24P35290 203 aa15.31■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Gm15294V9GXA7 121 aa15.31■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Trav9n-2A0A0G2JDP3 113 aa15.3■□□□□ 0.04
Ccdc88a-202ENSMUST00000109477 Krtap16-1A2A5X5 502 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms