RNA–Protein interactions for RNA: ENSMUST00000069168.12

Cpsf6-201, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-201ENSMUST00000069168 Dnajc13D4AFX7 2248 aaKnown RBP5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Ighv1-64A0A075B5X3 117 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Cmc4Q61908 68 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Ighv3-4A0A0A6YXF1 117 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm9970F6ZED4 185 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 P01739 132 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Prok1Q14A28 105 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Ang5Q5GAN1 145 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Defa4P28311 92 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 AY761184Q9D848 116 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Clec5aQ9R007 190 aa5.31□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Frem1Q684R7 2191 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm7849D3YX03 116 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm10767Q3TQP0 103 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Defa28D3Z1V9 94 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 BC107364E9Q5A2 140 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 P01811 117 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Defa25Q5G864 92 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm9936Q8C864 160 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Sfta2E9PXB6 77 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm29423A0A087WRM1 55 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Cox17P56394 63 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Cacna1hO88427 2365 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 P01741 114 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Tmem213Q08EA8 116 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Odf3l1Q810P2 275 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Klf13Q9JJZ6 289 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Timm17aQ9Z0V8 171 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 NbeaQ9EPN1 2936 aa5.3□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Col6a6Q8C6K9 2265 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Defa16P50714 93 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Map1bP14873 2464 aaKnown RBP5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Kmt2bO08550 2713 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Ighv1-50A0A075B5W1 117 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Trav4-3A0A0B4J1K1 110 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Col8a2P25318 699 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Defa26Q3L180 93 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 1500011B03RikQ3TTH7 73 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 A530064D06RikQ8BNV8 229 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Ighv5-9-1A0A0A6YVS4 126 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 P06330 118 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 H1fxQ80ZM5 188 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 UrahQ9CRB3 118 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Asxl3Q8C4A5 2259 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Mrps12O35680 139 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Trav4d-3A0A075B625 110 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Rnf185Q91YT2 192 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Tcf24V9GWT9 166 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Cmya5Q70KF4 3739 aa5.29□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm29666A0A087WQ99 126 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Zfand3Q497H0 227 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Il1f10Q8R459 152 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Ighv1-75A0A075B5Y2 117 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Fgf6P21658 208 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Taf15Q8BQ46 557 aaKnown RBP5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Q9D131 166 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Trbv16A0A0B4J1H3 115 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 F11rO88792 300 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 LeprotO89013 131 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Znf239P24399 201 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Gm904Q3V2L5 102 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 BtcQ05928 177 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Pla2g2eQ9QUL3 142 aa5.28□□□□□ -1.56
Cpsf6-201ENSMUST00000069168 Csmd2V9GX34 3611 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Ighv3-8A0A075B5T0 131 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Spta1P08032 2415 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Trdv5A0A075B661 115 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 P01750 117 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Pla2g2dQ9WVF6 144 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 P01896 185 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Rpl36aP83882 106 aaKnown RBP5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Map6d1Q14BB9 191 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Gm10775Q3V290 127 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Q9CX25 107 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Ankrd39Q9D2X0 183 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Trbv30A0A0B4J1P1 111 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Lect2O88803 151 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Defa2P28309 93 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Tspan13Q9D8C2 204 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Abca4O35600 2310 aa5.27□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Cox8cA6H666 72 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Samd13D3YUG0 102 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Atp5eP56382 52 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 CadB2RQC6 2225 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Pcnx1Q9QYC1 2344 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Gm5819E9PZ96 154 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Ebi3O35228 228 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Foxi2Q3I5G5 311 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Gm14137Q8CE97 175 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 HampQ9EQ21 83 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Cacna1iE9Q7P2 2199 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Igkv4-57-1A0A075B5M4 119 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Lgals4Q8K419 326 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Gm867A0A1W2P7T4 151 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 P04219 140 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Gm6040Q4QY32 63 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Nbl1Q61477 178 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Wfdc15bQ9JHY4 80 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 Igkv2-137A0A0B4J1H6 120 aa5.26□□□□□ -1.57
Cpsf6-201ENSMUST00000069168 MalO09198 153 aa5.26□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms