RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Ighv1-69A0A0G2JFS5 117 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Trav6d-4Q5R1I0 115 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Cd52Q64389 74 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Msrb2Q78J03 175 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 PmvkQ9D1G2 192 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ovol1Q9WTJ2 267 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ly6g6dQ9Z1Q3 135 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Cacna1hO88427 2365 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ighv4-1A0A075B5R5 116 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Igkv6-23A0A140T8N5 115 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Casp6O08738 276 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm10645Q3UPY1 145 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 4930432M17RikQ3V0W9 174 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ang5Q5GAN1 145 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Rnf152Q8BG47 203 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Wipf1Q8K1I7 493 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Dchs1E9PVD3 3291 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ighv1-9A0A0A6YW37 117 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Igkv6-15A0A140T8M5 115 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Defa7P50705 93 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 SbsponQ3UPR9 264 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Defa23Q5G866 93 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tmem14cQ9CQN6 114 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Zc2hc1bQ9D534 172 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Slc25a15Q9WVD5 301 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Myo15aQ9QZZ4 3511 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Arhgap32Q811P8 2089 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Zfp951A0A087WRH0 451 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Igkv4-81A0A0G2JEY5 119 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Amn1B8JKV0 258 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm17455G3UW87 128 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tmem95P0DJF3 176 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Iah1Q9DB29 249 aa4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Sptbn1Q62261 2363 aaKnown RBP4.36□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Armcx4E9PWM3 2356 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ighv1-77A0A0G2JGS9 117 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 P01724 129 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 P01727 129 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm5629P06327 117 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Egr2P08152 470 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 ScxQ64124 207 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Defa21Q8C1P2 93 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 SpinklQ8CEK3 90 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 RhohQ9D3G9 191 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Lama1P19137 3084 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tcf20Q9EPQ8 1987 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm2564F6Z9S8 108 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gata1P17679 413 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ccl11P48298 97 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ube2e1P52482 193 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Rpl39P62892 51 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Dlx6P70397 175 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tmem86bQ497J1 226 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm9936Q8C864 160 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 4930544G11RikQ9CR99 193 aa4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Cnot1Q6ZQ08 2375 aaKnown RBP4.35□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Znf575Q3TXZ1 239 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm17334Q8C6U3 126 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Higd1aQ9JLR9 95 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Col6a6Q8C6K9 2265 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Col12a1Q60847 3120 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Igf1P05017 153 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Map6d1Q14BB9 191 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 OtosQ8R448 89 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gvin1Q80SU7 2427 aa4.34□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ighv1-52A0A0A6YXC3 117 aa4.34□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Trbv13-1A0A0B4J1P8 112 aa4.34□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Mrps12O35680 139 aa4.34□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Gm5941Q497P9 117 aa4.34□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Dtx1Q61010 627 aa4.34□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Gm36368A0A1D5RLK8 91 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Wfdc11A2A5H7 82 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Colca2F8VPY8 239 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Ccl19O70460 108 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Hoxd3P09027 433 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Atp5g1Q9CR84 136 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Spry2Q9QXV8 315 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 TectaO08523 2155 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 AtmQ62388 3066 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Ighv1-55A0A075B5W6 117 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 NgfP01139 241 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Znf740Q6NZQ6 180 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 A530064D06RikQ8BNV8 229 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Fhl4Q8CDC8 279 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Mrpl35Q9CQL6 188 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Phpt1Q9DAK9 124 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Obox8V9GWY9 217 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Trav14d-3-dv8A0A075B619 120 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Gm10521E9PZK0 135 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 F11rO88792 300 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Egr1P08046 533 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 P84751 237 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 C1qcQ02105 246 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Gm9958Q8C9U4 106 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 4930415O20RikQ8CDT5 131 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Mpv17l2Q8VIK2 200 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Mrpl55Q9CZ83 127 aa4.33□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Gm19345G3UYD9 124 aa4.32□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 LeprotO89013 131 aa4.32□□□□□ -1.72
Rc3h1-201ENSMUST00000035911 Gm21748Q3UE70 102 aa4.32□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms