RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Tmem238A9JSM3 176 aa10.42□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Gm10553J3QPF1 123 aa10.42□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Gm9961Q8BNV2 113 aa10.42□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Cysltr1Q99JA4 352 aa10.42□□□□□ -0.74
Scarb2-201ENSMUST00000031377 PpdpfQ9CR37 115 aa10.42□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Abca2P41234 2434 aa10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Igkv4-57-1A0A075B5M4 119 aa10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Cks1bP61025 79 aa10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Usp9xP70398 2559 aaKnown RBP10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 P01748 117 aa10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Phpt1Q9DAK9 124 aa10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Ankhd1E9PUR0 2548 aaKnown RBP10.41□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Gm20481G3UXK4 153 aa10.4□□□□□ -0.74
Scarb2-201ENSMUST00000031377 BtcQ05928 177 aa10.4□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Trav2Q5R1I9 109 aa10.4□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Ccl19O70460 108 aa10.4□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Lrrk2Q5S006 2527 aa10.4□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Prrc2aQ7TSC1 2158 aaKnown RBP10.4□□□□□ -0.74
Scarb2-201ENSMUST00000031377 Ighv1-64A0A075B5X3 117 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 7420426K07RikQ3UX66 186 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Tmem101Q91VP7 257 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Znf239P24399 201 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Nsun4C4P6S0 806 aaKnown RBP10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ccl25O35903 144 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 P01750 117 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 UrahQ9CRB3 118 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Vsig4F6TUL9 280 aa10.39□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Lect2O88803 151 aa10.38□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Rpl39P62892 51 aa10.38□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Arhgap32Q811P8 2089 aa10.38□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Dkk4Q8VEJ3 221 aa10.38□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Bex1Q9R224 128 aa10.38□□□□□ -0.75
Scarb2-201ENSMUST00000031377 P01741 114 aa10.37□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Tcf24V9GWT9 166 aa10.37□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ighv1-50A0A075B5W1 117 aa10.37□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Zfand3Q497H0 227 aa10.37□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Iglc1A0A0G2JE99 106 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 P01843 105 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Gm10767Q3TQP0 103 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Nav3Q80TN7 2359 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ptpn13Q64512 2453 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 AtmQ62388 3066 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Gata4Q08369 441 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Rev3lQ61493 3122 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ndufa4l2Q4FZG9 87 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Odf3l1Q810P2 275 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ighv1-58A0A075B5W9 117 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Rbx1P62878 108 aa10.36□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Bod1lE9Q6J5 3032 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Gm15557A6PWY0 234 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Gm42674D3YUT9 64 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Cd27P41272 250 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ighv2-6A0A075B6A7 116 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Foxi2Q3I5G5 311 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Mapk1ip1lQ8BH93 242 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Zfp292Q9Z2U2 2698 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Gm26602M0QWA4 95 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 BC067074F6RXI4 2391 aa10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 AcanQ61282 2132 aaKnown RBP10.35□□□□□ -0.75
Scarb2-201ENSMUST00000031377 P01643 108 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Clec5aQ9R007 190 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Gm9573F7C950 1606 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Edn3P48299 214 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Olfr311Q5NC59 308 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Obox8V9GWY9 217 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Egr2P08152 470 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Cox7cP17665 63 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 E130116L18RikQ8BMV6 101 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Ociad2Q9D8W7 154 aa10.34□□□□□ -0.75
Scarb2-201ENSMUST00000031377 Igkv4-57A0A0A6YYE7 117 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ighv3-1A0A075B5S6 116 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Defa16P50714 93 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ifi27l2aQ8R412 90 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm20730A0A075B5J6 119 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Trbv30A0A0B4J1P1 111 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Lce6aD3YV94 81 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 OdaphJ3QNT8 126 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Defa20Q45VN2 95 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm26566Q8CAC1 153 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ighv1-12A0A0A6YXJ9 117 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Igkv4-71A0A0G2JEH0 117 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Ndufa1O35683 70 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Prp2P05143 317 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Cops9Q3U898 57 aa10.33□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Trav9-2A0A075B647 113 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Trav9-4A0A0B4J1K2 113 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Defa26Q3L180 93 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Synj2bpQ9D6K5 145 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Col27a1Q5QNQ9 1845 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Reg3gO09049 174 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm44965A0A0N4SVR3 59 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm21994F6T2D2 329 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Znf740Q6NZQ6 180 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Fam216aQ9DB54 251 aa10.32□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Hoxd3P09027 433 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Fgf6P21658 208 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Gm10775Q3V290 127 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Cox11Q6P8I6 275 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Rnf183Q8QZS5 190 aa10.31□□□□□ -0.76
Scarb2-201ENSMUST00000031377 Shisa9Q9CZN4 424 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms