RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Rhox8Q6VSS7 320 aa24.19■■□□□ 1.46
Scarb2-201ENSMUST00000031377 NischQ80TM9 1593 aa22.69■■□□□ 1.22
Scarb2-201ENSMUST00000031377 Ehmt2Q9Z148 1263 aaKnown RBP22.37■■□□□ 1.17
Scarb2-201ENSMUST00000031377 Rpgrip1Q9EPQ2 1331 aa22.18■■□□□ 1.14
Scarb2-201ENSMUST00000031377 Ccdc136Q3TVA9 1136 aa21.95■■□□□ 1.11
Scarb2-201ENSMUST00000031377 Abcc9P70170 1546 aa21.47■■□□□ 1.03
Scarb2-201ENSMUST00000031377 Trim41Q5NCC3 630 aa21.37■■□□□ 1.01
Scarb2-201ENSMUST00000031377 Acin1Q9JIX8 1338 aaKnown RBP21.33■■□□□ 1.01
Scarb2-201ENSMUST00000031377 Gab3Q8BSM5 595 aa21.28■■□□□ 1
Scarb2-201ENSMUST00000031377 Cngb1E1AZ71 1325 aa21.27■■□□□ 1
Scarb2-201ENSMUST00000031377 Ccdc180J3QNE4 1664 aa21.25■□□□□ 0.99
Scarb2-201ENSMUST00000031377 Zeb1Q64318 1117 aa21.15■□□□□ 0.98
Scarb2-201ENSMUST00000031377 Rtl1Q7M732 1744 aa21.06■□□□□ 0.96
Scarb2-201ENSMUST00000031377 Esf1Q3V1V3 845 aaKnown RBP21■□□□□ 0.95
Scarb2-201ENSMUST00000031377 Abcc8B2RUS7 1588 aa20.97■□□□□ 0.95
Scarb2-201ENSMUST00000031377 HrcG5E8J6 738 aa20.93■□□□□ 0.94
Scarb2-201ENSMUST00000031377 Wdr66E9Q743 1299 aa20.9■□□□□ 0.94
Scarb2-201ENSMUST00000031377 Pcgf6Q99NA9 353 aa20.8■□□□□ 0.92
Scarb2-201ENSMUST00000031377 Las1lA2BE28 776 aaKnown RBP20.71■□□□□ 0.91
Scarb2-201ENSMUST00000031377 Myt1lP97500 1187 aa20.63■□□□□ 0.89
Scarb2-201ENSMUST00000031377 UbtfP25976 765 aaKnown RBP20.52■□□□□ 0.88
Scarb2-201ENSMUST00000031377 Npm2Q80W85 207 aa20.5■□□□□ 0.87
Scarb2-201ENSMUST00000031377 Zcchc6Q5BLK4 1491 aaKnown RBP20.48■□□□□ 0.87
Scarb2-201ENSMUST00000031377 Gm35339A0A140LHH9 1649 aa20.48■□□□□ 0.87
Scarb2-201ENSMUST00000031377 Supt5hO55201 1082 aaKnown RBP20.48■□□□□ 0.87
Scarb2-201ENSMUST00000031377 NefmP08553 848 aa20.46■□□□□ 0.87
Scarb2-201ENSMUST00000031377 Ppargc1bQ8VHJ7 1014 aa20.2■□□□□ 0.82
Scarb2-201ENSMUST00000031377 Ube2uB1AUC4 352 aa20.12■□□□□ 0.81
Scarb2-201ENSMUST00000031377 Mier1Q5UAK0 511 aa20.12■□□□□ 0.81
Scarb2-201ENSMUST00000031377 Dcaf1Q80TR8 1506 aa20.06■□□□□ 0.8
Scarb2-201ENSMUST00000031377 Cdk11bP24788 784 aaKnown RBP19.97■□□□□ 0.79
Scarb2-201ENSMUST00000031377 Chic1Q8CBW7 227 aa19.96■□□□□ 0.79
Scarb2-201ENSMUST00000031377 Rb1cc1Q9ESK9 1588 aa19.94■□□□□ 0.78
Scarb2-201ENSMUST00000031377 Il27Q8K3I6 234 aa19.92■□□□□ 0.78
Scarb2-201ENSMUST00000031377 CenpbP27790 599 aa19.9■□□□□ 0.78
Scarb2-201ENSMUST00000031377 Nop58Q6DFW4 536 aaKnown RBP19.88■□□□□ 0.77
Scarb2-201ENSMUST00000031377 Neurod1Q60867 357 aa19.88■□□□□ 0.77
Scarb2-201ENSMUST00000031377 Ap3b1Q9Z1T1 1105 aa19.84■□□□□ 0.77
Scarb2-201ENSMUST00000031377 Cep164Q5DU05 1446 aa19.84■□□□□ 0.77
Scarb2-201ENSMUST00000031377 Sall2Q9QX96 1004 aa19.78■□□□□ 0.76
Scarb2-201ENSMUST00000031377 Slc24a1Q91WD8 1130 aa19.73■□□□□ 0.75
Scarb2-201ENSMUST00000031377 TonslQ6NZL6 1363 aa19.7■□□□□ 0.74
Scarb2-201ENSMUST00000031377 Plekhg3Q4VAC9 1341 aa19.67■□□□□ 0.74
Scarb2-201ENSMUST00000031377 Fam50aQ9WV03 339 aaKnown RBP19.64■□□□□ 0.73
Scarb2-201ENSMUST00000031377 Brd4Q9ESU6 1400 aaKnown RBP19.54■□□□□ 0.72
Scarb2-201ENSMUST00000031377 NclP09405 707 aaKnown RBP19.52■□□□□ 0.72
Scarb2-201ENSMUST00000031377 ClspnQ80YR7 1315 aa19.51■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Baz1aO88379 1555 aa19.51■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Pelp1Q9DBD5 1123 aaKnown RBP19.49■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Csrnp3P59055 597 aa19.47■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Stra8P70278 393 aa19.47■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Gm38655A0A286YDK6 273 aa19.46■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Eid3Q3V124 375 aa19.46■□□□□ 0.71
Scarb2-201ENSMUST00000031377 Mapk8ip2Q9ERE9 830 aa19.41■□□□□ 0.7
Scarb2-201ENSMUST00000031377 Anks4bQ8K3X6 423 aa19.37■□□□□ 0.69
Scarb2-201ENSMUST00000031377 NacadQ5SWP3 1504 aa19.35■□□□□ 0.69
Scarb2-201ENSMUST00000031377 Rsf1E9PWW9 1441 aaKnown RBP19.35■□□□□ 0.69
Scarb2-201ENSMUST00000031377 Lmod2Q3UHZ5 550 aa19.35■□□□□ 0.69
Scarb2-201ENSMUST00000031377 Aebp2Q9Z248 504 aaKnown RBP19.32■□□□□ 0.68
Scarb2-201ENSMUST00000031377 Tnnt3Q9QZ47 272 aa19.31■□□□□ 0.68
Scarb2-201ENSMUST00000031377 Kdm5dQ62240 1548 aa19.31■□□□□ 0.68
Scarb2-201ENSMUST00000031377 Clip1Q922J3 1391 aa19.3■□□□□ 0.68
Scarb2-201ENSMUST00000031377 Eif5bQ05D44 1216 aaKnown RBP19.25■□□□□ 0.67
Scarb2-201ENSMUST00000031377 Golga3P55937 1487 aa19.2■□□□□ 0.66
Scarb2-201ENSMUST00000031377 Ccdc88bQ4QRL3 1481 aa19.12■□□□□ 0.65
Scarb2-201ENSMUST00000031377 1700123L14RikQ3V2K7 440 aa19.11■□□□□ 0.65
Scarb2-201ENSMUST00000031377 NrdcQ8BHG1 1161 aa19.1■□□□□ 0.65
Scarb2-201ENSMUST00000031377 Myt1Q8CFC2 1127 aa19.1■□□□□ 0.65
Scarb2-201ENSMUST00000031377 Ttbk1Q6PCN3 1308 aa19.04■□□□□ 0.64
Scarb2-201ENSMUST00000031377 Aplp2Q06335 707 aa19.02■□□□□ 0.64
Scarb2-201ENSMUST00000031377 Npm1Q61937 292 aaKnown RBP19■□□□□ 0.63
Scarb2-201ENSMUST00000031377 ScribQ80U72 1612 aa18.92■□□□□ 0.62
Scarb2-201ENSMUST00000031377 Anp32aO35381 247 aa18.84■□□□□ 0.61
Scarb2-201ENSMUST00000031377 BlmO88700 1416 aa18.84■□□□□ 0.61
Scarb2-201ENSMUST00000031377 Amer1Q7TS75 1132 aa18.83■□□□□ 0.6
Scarb2-201ENSMUST00000031377 Setd5Q5XJV7 1441 aa18.82■□□□□ 0.6
Scarb2-201ENSMUST00000031377 Zbtb7cQ8VCZ7 619 aa18.82■□□□□ 0.6
Scarb2-201ENSMUST00000031377 Chic2Q9D9G3 165 aa18.78■□□□□ 0.6
Scarb2-201ENSMUST00000031377 Cecr2E9Q2Z1 1453 aa18.77■□□□□ 0.6
Scarb2-201ENSMUST00000031377 Smarca2Q6DIC0 1577 aa18.76■□□□□ 0.59
Scarb2-201ENSMUST00000031377 Zbtb4Q5F293 982 aa18.75■□□□□ 0.59
Scarb2-201ENSMUST00000031377 Anp32bQ9EST5 272 aaKnown RBP18.73■□□□□ 0.59
Scarb2-201ENSMUST00000031377 Calr4Q3TQS0 420 aa18.69■□□□□ 0.58
Scarb2-201ENSMUST00000031377 NeflP08551 543 aa18.68■□□□□ 0.58
Scarb2-201ENSMUST00000031377 Cep162Q6ZQ06 1403 aa18.67■□□□□ 0.58
Scarb2-201ENSMUST00000031377 SafbD3YXK2 937 aaKnown RBP18.66■□□□□ 0.58
Scarb2-201ENSMUST00000031377 Sycp2Q9CUU3 1500 aa18.66■□□□□ 0.58
Scarb2-201ENSMUST00000031377 Hnrnpul2Q00PI9 745 aaKnown RBP18.65■□□□□ 0.58
Scarb2-201ENSMUST00000031377 Eea1Q8BL66 1411 aa18.64■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Ccer2J3QPU5 274 aa18.63■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Crybg2B7ZCC2 1516 aa18.63■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Fam71e1A1L3C1 212 aa18.62■□□□□ 0.57
Scarb2-201ENSMUST00000031377 4933416C03RikQ3V063 378 aa18.61■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Os9Q8K2C7 672 aa18.6■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Ubl4bQ9CQ84 188 aa18.6■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Kif15Q6P9L6 1387 aa18.6■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Ppp4r2Q0VGB7 417 aa18.59■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Mrs2Q5NCE8 434 aa18.59■□□□□ 0.57
Scarb2-201ENSMUST00000031377 CftrP26361 1476 aa18.58■□□□□ 0.57
Scarb2-201ENSMUST00000031377 Synj1Q8CHC4 1574 aa18.57■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms