RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ighv1-12A0A0A6YXJ9 117 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Wfdc11A2A5H7 82 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Prr3Q811B5 190 aaKnown RBP7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Jmjd1cQ69ZK6 2350 aa7.18□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Igkv8-26A0A075B5N5 123 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Mrps12O35680 139 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Rnf144bQ8BKD6 301 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 1700010B08RikQ9DAI7 102 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm10295Q8CCF3 114 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Bub3Q9WVA3 326 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Spink8Q09TK9 105 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 4930546C10RikE9Q4Y3 121 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tmem254aP0DN89 123 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tmem254bP0DN90 123 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tmem254cP0DN91 123 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Znrd1Q791N7 123 aa7.17□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Igkv4-74A0A0B4J1I3 119 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Defb29Q8BGW9 78 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tm2d2Q8R0I4 213 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Egr2P08152 470 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tcl1b3P56842 122 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 B9d2Q3UK10 175 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ociad2Q9D8W7 154 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Myo7bQ99MZ6 2113 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Sbf1Q6ZPE2 1867 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 P01729 129 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Psmb11Q8BG41 302 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Msrb3Q8BU85 253 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Ormdl1Q921I0 153 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 LitafQ9JLJ0 161 aa7.16□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Gm14137Q8CE97 175 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Odf3Q920N1 254 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Exph5Q0VAV2 1960 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 SptssbQ925E8 76 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Igkv2-137A0A0B4J1H6 120 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Trav11A0A0B4J1J9 114 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Runx1Q03347 451 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Tm2d1Q99MB3 208 aa7.15□□□□□ -1.26
Ccdc47-201ENSMUST00000002043 Igkv8-18A0A0B4J1J3 123 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 P01791 123 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Vpreb2P13373 142 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Cox7b2Q9D2H1 82 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 P01753 117 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gata1P17679 413 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Smim20D3Z7Q2 69 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Prok1Q14A28 105 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Q80X32 188 aaKnown RBP7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Nop10Q9CQS2 64 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Hrct1Q9D6B9 109 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Wnk1P83741 2377 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm17677B3GLJ5 116 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ly6gP35461 111 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ndufb4Q9CQC7 129 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 SelenokQ9JLJ1 94 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ighv2-6A0A075B6A7 116 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Fam110dQ80X91 271 aa7.14□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ighv6-7A0A0A6YWU3 119 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Nbl1Q61477 178 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Foxc1Q61572 553 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 PtprdQ64487 1912 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ighv1-11A0A0A6YWI9 117 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Plxna3P70208 1872 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Fhl1P97447 280 aaKnown RBP7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Fxyd5P97808 178 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ppp1r32Q148A4 427 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Fam222aQ6PGH4 453 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm9513B3GLJ6 99 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Rmi2Q3UPE3 149 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 PkdrejQ9Z0T6 2126 aa7.13□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm15091B1AZM2 449 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm21994F6T2D2 329 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm20604F8WIA3 75 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 3110021N24RikJ3QMN2 152 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 P01745 121 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Foxi2Q3I5G5 311 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Cryba4Q9JJV0 196 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Cd24P24807 76 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Prop1P97458 223 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 9930022D16RikQ8BG27 128 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Mrpl52Q9D0Y8 121 aa7.12□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 TncQ80YX1 2110 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm5878E9PUB3 99 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 4933414I15RikQ9D4D5 133 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm15294V9GXA7 121 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 CadB2RQC6 2225 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Iglc1A0A0G2JE99 106 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 P01843 105 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Gm5468Q8C3D3 155 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Prok2Q9QXU7 128 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 P01748 117 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Camk2n2Q78WH7 79 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 LctF8VPT3 1931 aa7.11□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Nxph4G3X9N5 304 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Naa38Q9D2U5 125 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Col11a1Q61245 1804 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ighv1-53A0A075B5W3 117 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Ighv1-61P01749 117 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 AngP21570 145 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 NpyP57774 97 aa7.1□□□□□ -1.27
Ccdc47-201ENSMUST00000002043 Plxna4Q80UG2 1893 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms